Gene
RNA
| Item | Value |
|---|---|
| gene id | G142078 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 18588574 ~ 18692204 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU178734 | False | 388 | TUCP | 0.44 | 2 | 18666767 | 18692204 |
| TU178735 | True | 798 | lncRNA | 0.40 | 3 | 18588574 | 18670509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003306 | LOC106586852,LOC105012299,LOC107729347,LOC107746059 | coding | upstream | 94784 | 18439507 ~ 18493790 (+) |
| AMCG00003305 | NA | coding | upstream | 248739 | 18306046 ~ 18339835 (+) |
| AMCG00003302 | xpnpep1,LOC106512107,LOC106589391 | coding | upstream | 515433 | 18061436 ~ 18073141 (+) |
| AMCG00003301 | NA | coding | upstream | 529559 | 18040775 ~ 18059015 (+) |
| AMCG00003295 | smndc1 | coding | upstream | 691869 | 17892223 ~ 17896705 (+) |
| AMCG00003312 | neurl1,LOC107676877,LOC107746293 | coding | downstream | 492929 | 19185133 ~ 19195816 (+) |
| AMCG00003311 | LOC103355274,LOC101166281 | coding | downstream | 518379 | 19210583 ~ 19224956 (+) |
| AMCG00003315 | slk | coding | downstream | 723488 | 19415692 ~ 19454966 (+) |
| AMCG00003316 | NA | coding | downstream | 877600 | 19569804 ~ 19573974 (+) |
| AMCG00003321 | NA | coding | downstream | 896430 | 19588634 ~ 19605421 (+) |
| G142062 | NA | non-coding | upstream | 92297 | 18494924 ~ 18496277 (+) |
| G142014 | NA | non-coding | upstream | 588139 | 17939861 ~ 18000435 (+) |
| G141999 | smc3,LOC107685530 | non-coding | upstream | 747970 | 17838711 ~ 17840604 (+) |
| G141966 | NA | non-coding | upstream | 875710 | 17712660 ~ 17712864 (+) |
| G141965 | NA | non-coding | upstream | 885114 | 17703172 ~ 17703460 (+) |
| G142083 | NA | non-coding | downstream | 64709 | 18756913 ~ 18757187 (+) |
| G142085 | NA | non-coding | downstream | 143336 | 18835540 ~ 18840753 (+) |
| G142086 | NA | non-coding | downstream | 150250 | 18842454 ~ 18842729 (+) |
| G142146 | NA | non-coding | downstream | 820279 | 19512483 ~ 19513132 (+) |
| G142170 | NA | non-coding | downstream | 839208 | 19531412 ~ 19531867 (+) |
| AMCG00003291 | bbip1 | other | upstream | 863193 | 17721244 ~ 17725381 (+) |
| G141962 | NA | other | upstream | 910052 | 17676279 ~ 17678522 (+) |
| AMCG00003256 | NA | other | upstream | 2029368 | 16527189 ~ 16559206 (+) |
| AMCG00003257 | ablim1 | other | upstream | 2087580 | 16464294 ~ 16500994 (+) |
| AMCG00003207 | NA | other | upstream | 3983026 | 14601317 ~ 14605548 (+) |
| G142172 | NA | other | downstream | 843489 | 19535693 ~ 19537091 (+) |
| AMCG00003323 | rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 | other | downstream | 926677 | 19618881 ~ 19633150 (+) |
| AMCG00003324 | NA | other | downstream | 958972 | 19651176 ~ 19658477 (+) |
