G142083


Basic Information

Item Value
gene id G142083
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 18756913 ~ 18757187 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178740
atacactcacctaaaggatttttaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtgctcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtcaTTTAAGCAATTCTGAAGATTAATAATCAAGTTATTTGGATGAAAAAATGACATAaacacagctttttaaaaatgctgttgaCCAATcaaaaatcttttaaaacaaac

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0048513 animal organ development biological_process
GO:0001501 skeletal system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048562 embryonic organ morphogenesis biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178740 True 275 lncRNA 0.34 1 18756913 18757187

Neighbor

gene id symbol gene type direction distance location
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding upstream 263123 18439507 ~ 18493790 (+)
AMCG00003305 NA coding upstream 417078 18306046 ~ 18339835 (+)
AMCG00003302 xpnpep1,LOC106512107,LOC106589391 coding upstream 683772 18061436 ~ 18073141 (+)
AMCG00003301 NA coding upstream 697898 18040775 ~ 18059015 (+)
AMCG00003295 smndc1 coding upstream 860208 17892223 ~ 17896705 (+)
AMCG00003312 neurl1,LOC107676877,LOC107746293 coding downstream 427946 19185133 ~ 19195816 (+)
AMCG00003311 LOC103355274,LOC101166281 coding downstream 453396 19210583 ~ 19224956 (+)
AMCG00003315 slk coding downstream 658505 19415692 ~ 19454966 (+)
AMCG00003316 NA coding downstream 812617 19569804 ~ 19573974 (+)
AMCG00003321 NA coding downstream 831447 19588634 ~ 19605421 (+)
G142062 NA non-coding upstream 260636 18494924 ~ 18496277 (+)
G142014 NA non-coding upstream 756478 17939861 ~ 18000435 (+)
G141999 smc3,LOC107685530 non-coding upstream 916309 17838711 ~ 17840604 (+)
G141966 NA non-coding upstream 1044049 17712660 ~ 17712864 (+)
G141965 NA non-coding upstream 1053453 17703172 ~ 17703460 (+)
G142085 NA non-coding downstream 78353 18835540 ~ 18840753 (+)
G142086 NA non-coding downstream 85267 18842454 ~ 18842729 (+)
G142146 NA non-coding downstream 755296 19512483 ~ 19513132 (+)
G142170 NA non-coding downstream 774225 19531412 ~ 19531867 (+)
G142174 NA non-coding downstream 783855 19541042 ~ 19541247 (+)
G142078 NA other upstream 64709 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 1031532 17721244 ~ 17725381 (+)
G141962 NA other upstream 1078391 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 2197707 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 2255919 16464294 ~ 16500994 (+)
G142172 NA other downstream 778506 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 861694 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 893989 19651176 ~ 19658477 (+)

Expression


Co-expression Network