G142086


Basic Information

Item Value
gene id G142086
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 18842454 ~ 18842729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178743
CCCTGGTCTCCAGCTCCTTTTCCAGCCTCTCCTCGGGACCGGAGAACTCGCTCAGCGTTATTTTGGGCGTGCTCTCACTTTGGCTGACGGAGCCAATCATCTCTTGCTCTTTCTCATGGTTGACCTCGGCGTAGATGTTGATCCATGGGATTTTTCTATAGATAagataaaagaaaggaaaaccagCTGTGTATGTAATTTTGACATGCCATGGGTGAGCTATTGCTTTTAACTCTAAAGAGAGAACTCAAAATGAATGGGCTCCACTGATTTCAC

Function

NR:

description
PREDICTED: zinc finger protein 410-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178743 True 276 lncRNA 0.46 1 18842454 18842729

Neighbor

gene id symbol gene type direction distance location
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding upstream 348664 18439507 ~ 18493790 (+)
AMCG00003305 NA coding upstream 502619 18306046 ~ 18339835 (+)
AMCG00003302 xpnpep1,LOC106512107,LOC106589391 coding upstream 769313 18061436 ~ 18073141 (+)
AMCG00003301 NA coding upstream 783439 18040775 ~ 18059015 (+)
AMCG00003295 smndc1 coding upstream 945749 17892223 ~ 17896705 (+)
AMCG00003312 neurl1,LOC107676877,LOC107746293 coding downstream 342404 19185133 ~ 19195816 (+)
AMCG00003311 LOC103355274,LOC101166281 coding downstream 367854 19210583 ~ 19224956 (+)
AMCG00003315 slk coding downstream 572963 19415692 ~ 19454966 (+)
AMCG00003316 NA coding downstream 727075 19569804 ~ 19573974 (+)
AMCG00003321 NA coding downstream 745905 19588634 ~ 19605421 (+)
G142085 NA non-coding upstream 1701 18835540 ~ 18840753 (+)
G142083 NA non-coding upstream 85267 18756913 ~ 18757187 (+)
G142062 NA non-coding upstream 346177 18494924 ~ 18496277 (+)
G142014 NA non-coding upstream 842019 17939861 ~ 18000435 (+)
G141999 smc3,LOC107685530 non-coding upstream 1001850 17838711 ~ 17840604 (+)
G142146 NA non-coding downstream 669754 19512483 ~ 19513132 (+)
G142170 NA non-coding downstream 688683 19531412 ~ 19531867 (+)
G142174 NA non-coding downstream 698313 19541042 ~ 19541247 (+)
G142194 NA non-coding downstream 751149 19593878 ~ 19594267 (+)
G142205 NA non-coding downstream 773532 19616261 ~ 19616567 (+)
G142078 NA other upstream 150250 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 1117073 17721244 ~ 17725381 (+)
G141962 NA other upstream 1163932 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 2283248 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 2341460 16464294 ~ 16500994 (+)
G142172 NA other downstream 692964 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 776152 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 808447 19651176 ~ 19658477 (+)

Expression


Co-expression Network