G142170


Basic Information

Item Value
gene id G142170
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19531412 ~ 19531867 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178854
cttttgtttaaacatttttctcttcATATGGACTTCGTGATGATTTATAACTCTGAAATTGCATTCTCCTTTGTTCccatgtgtatatatgcatgtttttacatgtactgacaagttaaaatgtataccttttatttaattatttatttacatatttcctAAAAGTGATGTAGGAaaaattcagaaatgtaaacCTGTGCATTGGTCTAGTTTCAATTAAAACGATGCTGTAGAGATCCTGTCTATTTTTACTCCATACTCTGTCATACTCTTTGTGCTGATTAGTGTTCAAAttggaccagggctgggaagGTCTTCATTCTCATTCTTTCCACCTCTGCTCGGAGGATTGCAACCTCCTGAGCTTGTGCTTTGGCCAGGTCCACCAGTCTTTTTCTCTGGAGGATGTCTTTGTACCGTTCCTCTGCACTGCTCTCCTGATTCTGCTCCACCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178854 True 456 lncRNA 0.38 1 19531412 19531867

Neighbor

gene id symbol gene type direction distance location
AMCG00003315 slk coding upstream 76446 19415692 ~ 19454966 (+)
AMCG00003311 LOC103355274,LOC101166281 coding upstream 306456 19210583 ~ 19224956 (+)
AMCG00003312 neurl1,LOC107676877,LOC107746293 coding upstream 335596 19185133 ~ 19195816 (+)
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding upstream 1037622 18439507 ~ 18493790 (+)
AMCG00003305 NA coding upstream 1191577 18306046 ~ 18339835 (+)
AMCG00003316 NA coding downstream 37937 19569804 ~ 19573974 (+)
AMCG00003321 NA coding downstream 56767 19588634 ~ 19605421 (+)
AMCG00003322 NA coding downstream 78887 19610754 ~ 19614023 (+)
AMCG00003328 NA coding downstream 130217 19662084 ~ 19677407 (+)
AMCG00003329 NA coding downstream 178329 19710196 ~ 19728221 (+)
G142146 NA non-coding upstream 18280 19512483 ~ 19513132 (+)
G142086 NA non-coding upstream 688683 18842454 ~ 18842729 (+)
G142085 NA non-coding upstream 690659 18835540 ~ 18840753 (+)
G142083 NA non-coding upstream 774225 18756913 ~ 18757187 (+)
G142062 NA non-coding upstream 1035135 18494924 ~ 18496277 (+)
G142174 NA non-coding downstream 9175 19541042 ~ 19541247 (+)
G142194 NA non-coding downstream 62011 19593878 ~ 19594267 (+)
G142205 NA non-coding downstream 84394 19616261 ~ 19616567 (+)
G142340 NA non-coding downstream 596500 20128367 ~ 20128715 (+)
G142354 NA non-coding downstream 742466 20274333 ~ 20274616 (+)
G142078 NA other upstream 839208 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 1806031 17721244 ~ 17725381 (+)
G141962 NA other upstream 1852890 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 2972206 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 3030418 16464294 ~ 16500994 (+)
G142172 NA other downstream 3826 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 87014 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 119309 19651176 ~ 19658477 (+)

Expression


Co-expression Network