G142172


Basic Information

Item Value
gene id G142172
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19535693 ~ 19537091 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178857
AGCAAGACATTGCAGAGGACttaaagaagcacaaagaagATGTTGATGCCTTCAGAGAGACCTATGataacactgttgcagaagacAAACTGCGTGACCGTGGTTTCAGAAAGGACTTCTTTGATGTCCCTGGCCATGTAGTAGAAGACCTGTACAAACTTTTTAAGCGCCGACCCAGGGTGCAGAAAATGAGGACAGAAAACAGCAGTCCTTTCAAAGACCGTGCAGGGTCCGCAACAGCACCGGATGAAGGCCTGTCTCAGCTGATGAGAGCCATGGAGGAATTGGACGTCCCTGAAAACATTCCACAGGGCGTGGACCTGGCTGTGTGGGAGCGCTTCTGTCTGGCCAGGAGAGCCAAGGTTGAGAGCGAACATCAAGTTCAACAGAAAGCGCTGACACTTGCTGAAATGCAGGCTTTTCTACAGAGGAGAACAGAGGAGGATGACAGTGCCAGAAAGGAGATTCAGAACCTCACTGATGAGCTCAATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178857 True 494 TUCP 0.50 4 19535693 19537091

Neighbor

gene id symbol gene type direction distance location
AMCG00003315 slk coding upstream 80727 19415692 ~ 19454966 (+)
AMCG00003311 LOC103355274,LOC101166281 coding upstream 310737 19210583 ~ 19224956 (+)
AMCG00003312 neurl1,LOC107676877,LOC107746293 coding upstream 339877 19185133 ~ 19195816 (+)
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding upstream 1041903 18439507 ~ 18493790 (+)
AMCG00003305 NA coding upstream 1195858 18306046 ~ 18339835 (+)
AMCG00003316 NA coding downstream 32713 19569804 ~ 19573974 (+)
AMCG00003321 NA coding downstream 51543 19588634 ~ 19605421 (+)
AMCG00003322 NA coding downstream 73663 19610754 ~ 19614023 (+)
AMCG00003328 NA coding downstream 124993 19662084 ~ 19677407 (+)
AMCG00003329 NA coding downstream 173105 19710196 ~ 19728221 (+)
G142170 NA non-coding upstream 3826 19531412 ~ 19531867 (+)
G142146 NA non-coding upstream 22561 19512483 ~ 19513132 (+)
G142086 NA non-coding upstream 692964 18842454 ~ 18842729 (+)
G142085 NA non-coding upstream 694940 18835540 ~ 18840753 (+)
G142083 NA non-coding upstream 778506 18756913 ~ 18757187 (+)
G142174 NA non-coding downstream 3951 19541042 ~ 19541247 (+)
G142194 NA non-coding downstream 56787 19593878 ~ 19594267 (+)
G142205 NA non-coding downstream 79170 19616261 ~ 19616567 (+)
G142340 NA non-coding downstream 591276 20128367 ~ 20128715 (+)
G142354 NA non-coding downstream 737242 20274333 ~ 20274616 (+)
G142078 NA other upstream 843489 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 1810312 17721244 ~ 17725381 (+)
G141962 NA other upstream 1857171 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 2976487 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 3034699 16464294 ~ 16500994 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 81790 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 114085 19651176 ~ 19658477 (+)

Expression


Co-expression Network