G142176


Basic Information

Item Value
gene id G142176
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19548641 ~ 19548932 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178861
CCCAACCACAAACTCACGCCACCTCCTCACGACACAGCCAGCGGGTCCGAGTTATTGTCAGCCGCTCGTCCGGACTCGGGCCGGTCAGCGGCAGCAGGCCTGATGATGGATCGTACCTTCGCCATGTCGGTCCTTCCTTCCTCTCGACGATTTTGGCTCACACTAATACAATTTACGCGAcgaatgaaaaacaataacagaaattGGGACCGATGTTAACAAAGATAAACTCGTTAGTCTCCGTACGCAATGCACTACAACAAACTGATCGACGTCTCAATACCAACTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178861 True 292 lncRNA 0.51 1 19548641 19548932

Neighbor

gene id symbol gene type direction distance location
AMCG00003319 NA coding downstream 60439 19484791 ~ 19488202 (-)
AMCG00003317 NA coding downstream 85776 19456531 ~ 19462865 (-)
AMCG00003314 NA coding downstream 133819 19402585 ~ 19414822 (-)
AMCG00003313 NA coding downstream 293924 19231811 ~ 19254717 (-)
AMCG00003308 NA coding downstream 419259 19120860 ~ 19129382 (-)
AMCG00003318 NA coding upstream 25993 19574925 ~ 19586023 (-)
AMCG00003325 NA coding upstream 84956 19633888 ~ 19654154 (-)
AMCG00003326 LOC106564630,LOC106588642 coding upstream 107733 19656665 ~ 19661649 (-)
AMCG00003330 LOC106588656,LOC106564629,LOC105012231 coding upstream 151054 19699986 ~ 19706889 (-)
AMCG00003336 cnnm2,LOC107588659,LOC107673921,LOC107656926,LOC107585325,LOC107716327 coding upstream 198494 19747426 ~ 19762294 (-)
G142090 NA non-coding downstream 711156 18835540 ~ 18837485 (-)
G142066 NA non-coding downstream 1241958 18306362 ~ 18306683 (-)
G142064 NA non-coding downstream 1243663 18304631 ~ 18304978 (-)
G142060 NA non-coding downstream 1261429 18287003 ~ 18287212 (-)
G141879 LOC107575789 non-coding downstream 2610595 16937634 ~ 16938046 (-)
G142200 NA non-coding upstream 48397 19597329 ~ 19599114 (-)
G142348 NA non-coding upstream 631863 20180795 ~ 20181023 (-)
G142357 NA non-coding upstream 826454 20375386 ~ 20375626 (-)
G142404 NA non-coding upstream 1106131 20655063 ~ 20669631 (-)
G142406 NA non-coding upstream 1110680 20659612 ~ 20743604 (-)
G141826 NA other downstream 2800210 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 4407822 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 4874221 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 6118317 13407272 ~ 13430324 (-)
G141004 NA other downstream 6669220 12861426 ~ 12879421 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 253147 19802079 ~ 19876762 (-)

Expression


Co-expression Network