G142348


Basic Information

Item Value
gene id G142348
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20180795 ~ 20181023 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179066
tggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacagacgcacccggggacacaaatggaaattgggcttcaaggcattcaaaacggaaaacaggagacacttcttcacacagagagtagtcacaatctggaacaaactccccagcaatgtggtagaagctgaaaatttgggaacatttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179066 True 229 lncRNA 0.45 1 20180795 20181023

Neighbor

gene id symbol gene type direction distance location
AMCG00003344 tlx1,LOC107585374,LOC107588667,LOC107694453 coding downstream 15212 20159328 ~ 20165583 (-)
AMCG00003341 fbxw11b,LOC106568099,LOC105893085,LOC107687420,LOC105905987 coding downstream 147206 20019858 ~ 20033589 (-)
AMCG00003342 slc2a15a,LOC107716293,LOC107673883,LOC107696166,LOC107708408,LOC108442702,LOC103035008,LOC107585370 coding downstream 175482 19995019 ~ 20005313 (-)
AMCG00003339 fgf8a,fgf8,LOC107673879,LOC107585369,LOC107716294,LOC107696243 coding downstream 251524 19910276 ~ 19929271 (-)
AMCG00003338 NA coding downstream 280563 19895311 ~ 19900232 (-)
AMCG00003345 NA coding upstream 42800 20223823 ~ 20362586 (-)
AMCG00003347 NA coding upstream 420729 20601752 ~ 20604005 (-)
AMCG00003346 NA coding upstream 442380 20623403 ~ 20629596 (-)
AMCG00003350 LOC106532717 coding upstream 595556 20776579 ~ 20796389 (-)
AMCG00003353 NA coding upstream 709728 20890751 ~ 20892570 (-)
G142200 NA non-coding downstream 581681 19597329 ~ 19599114 (-)
G142176 NA non-coding downstream 631863 19548641 ~ 19548932 (-)
G142090 NA non-coding downstream 1343310 18835540 ~ 18837485 (-)
G142066 NA non-coding downstream 1874112 18306362 ~ 18306683 (-)
G142064 NA non-coding downstream 1875817 18304631 ~ 18304978 (-)
G142357 NA non-coding upstream 194363 20375386 ~ 20375626 (-)
G142404 NA non-coding upstream 474040 20655063 ~ 20669631 (-)
G142406 NA non-coding upstream 478589 20659612 ~ 20743604 (-)
G142417 NA non-coding upstream 577096 20758119 ~ 20758457 (-)
G142418 NA non-coding upstream 583521 20764544 ~ 20766330 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 304033 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 611180 19543637 ~ 19569615 (-)
G141826 NA other downstream 3432364 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5039976 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 5506375 14669415 ~ 14674420 (-)

Expression


Co-expression Network