G142421


Basic Information

Item Value
gene id G142421
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20770723 ~ 20771795 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179148
tacatttatttcagttcttgGTTATAGTAGTGTAAAAGCTTTCACATCACAGCAAGCTGCacacatttgcaaacaaattaaaatgaaacacacagcacagtgtctcTCATTAAATACACAGCCAAAACCTGCATTCCATGTTGCAACTACAGTGTGTAATACAGCAATTCAACCACACAGGGGCACTGTAgcttacaagaaaacaaaaatatatacataaaagtgATGCAGTCAGCACTCAGTTACCATCAAGGTCATCCCTGGattcacaattaaaaagattttaaaCCCTACTGAGTTACAGTGCCTCTCATATAAAAAGGGGAAGGCAACTCCAAACAGGCAGTCTCCAAACCtgcacagtttaaaaacaaaaatgctgggTACTGGGAGCTCACACTATATGCAAGCCTGCAGGACATGCAGTGACCTCGCTGCACAGTGAGCATGTAAAGGATTAATATCCAGCTCACGCTTTCCTGGCTTATTGAAAACCATACATTCAAAAgattcccctccccctcctccaaaAACAGACTGAGCACTGTCATGAAGTGCTTCCCTCTAGATTTACCTGCTCCTGAAGCATGTCTTTAAATACCCCCCTACCCACTTTAAATTGACATCAAATCAATTGATAATGATGATTTAAATCAAGAGGTCAGAATTGTACAGCAGCAGATCTTTAACGAACCTAGTGCAGCCTGTTCCTTTAAAGAGAGACGTTCCAGGCTTTTTCTGGGAATACCTTAAGAAAATCAGGCAACTGTCCAATCTTTTTTCTCCAAACTAAATTATCTAAAATtttccaaattaacatttattcctttgtagaaaaaaaaaccattGCTTTACTCTTTTAATGCCTGTTTTGTCTTTCTAGATTTGAATCTTCAAAGGTTTACAGTTTTGGGTTGTTAATTTCAGACTGGTGGTTAGTGCGAACAATTAAGGTACAAGCCAGTgaaatattgctttattatttttttaatattattttttacagtggaATAATCGCAAAATTATGAGGCAAAAGCTCAAGGCACAAACAGTAGCACTGGAAACCTTCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179148 True 1073 lncRNA 0.38 1 20770723 20771795

Neighbor

gene id symbol gene type direction distance location
AMCG00003346 NA coding downstream 141127 20623403 ~ 20629596 (-)
AMCG00003347 NA coding downstream 166718 20601752 ~ 20604005 (-)
AMCG00003345 NA coding downstream 408137 20223823 ~ 20362586 (-)
AMCG00003344 tlx1,LOC107585374,LOC107588667,LOC107694453 coding downstream 605140 20159328 ~ 20165583 (-)
AMCG00003341 fbxw11b,LOC106568099,LOC105893085,LOC107687420,LOC105905987 coding downstream 737134 20019858 ~ 20033589 (-)
AMCG00003350 LOC106532717 coding upstream 4784 20776579 ~ 20796389 (-)
AMCG00003353 NA coding upstream 118956 20890751 ~ 20892570 (-)
AMCG00003354 NA coding upstream 135885 20907680 ~ 20912693 (-)
AMCG00003352 NA coding upstream 170961 20942756 ~ 20945804 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding upstream 220690 20992485 ~ 20996275 (-)
G142420 NA non-coding downstream 3093 20767354 ~ 20767630 (-)
G142418 NA non-coding downstream 4393 20764544 ~ 20766330 (-)
G142417 NA non-coding downstream 12266 20758119 ~ 20758457 (-)
G142406 NA non-coding downstream 27119 20659612 ~ 20743604 (-)
G142404 NA non-coding downstream 101092 20655063 ~ 20669631 (-)
G142433 NA non-coding upstream 38163 20809958 ~ 20810651 (-)
G142439 NA non-coding upstream 41278 20813073 ~ 20813646 (-)
G142440 NA non-coding upstream 43104 20814899 ~ 20815198 (-)
G142531 NA non-coding upstream 404549 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 475748 21247543 ~ 21248434 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 893961 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1201108 19543637 ~ 19569615 (-)
G141826 NA other downstream 4022292 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5629904 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6096303 14669415 ~ 14674420 (-)

Expression


Co-expression Network