G142482


Basic Information

Item Value
gene id G142482
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 21103820 ~ 21143131 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179214
tctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatgtcaaaccaaaccaaacccacaatctctctgcctcctcccacaacaggggatAGTCTTCACAATGGCTTgcttttacaaaaagctctggaaaGCATCCGCATACGCTTAAGCCAACACTttaacttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179214 True 413 lncRNA 0.43 2 21103820 21143131

Neighbor

gene id symbol gene type direction distance location
AMCG00003351 morn4,LOC107719210 coding upstream 339135 20760320 ~ 20764685 (+)
AMCG00003348 NA coding upstream 510320 20492359 ~ 20593500 (+)
AMCG00003349 slit1,LOC107558211,LOC107753728,LOC107705008,LOC107699140 coding upstream 695136 20403696 ~ 20408684 (+)
AMCG00003343 lbx1a,lbx1,LOC107585373,LOC107716305 coding upstream 976264 20126144 ~ 20127556 (+)
AMCG00003340 NA coding upstream 1125905 19955769 ~ 19977915 (+)
AMCG00003359 NA coding downstream 8720 21151851 ~ 21177530 (+)
AMCG00003361 NA coding downstream 382506 21525637 ~ 21748601 (+)
AMCG00003363 NA coding downstream 610215 21753346 ~ 21755934 (+)
AMCG00003370 NA coding downstream 903182 22046313 ~ 22067314 (+)
AMCG00003371 NA coding downstream 991770 22134901 ~ 22144437 (+)
G142419 NA non-coding upstream 332041 20767354 ~ 20771779 (+)
G142412 NA non-coding upstream 354456 20745545 ~ 20749364 (+)
G142397 NA non-coding upstream 459026 20644481 ~ 20644794 (+)
G142376 NA non-coding upstream 504275 20595470 ~ 20599545 (+)
G142354 NA non-coding upstream 829204 20274333 ~ 20274616 (+)
G142556 NA non-coding downstream 430983 21574114 ~ 21659778 (+)
G142572 NA non-coding downstream 623210 21766341 ~ 21766544 (+)
G142580 NA non-coding downstream 657888 21801019 ~ 21806660 (+)
G142620 NA non-coding downstream 848381 21991512 ~ 21994674 (+)
G142664 NA non-coding downstream 948570 22091701 ~ 22094748 (+)
AMCG00003324 NA other upstream 1445343 19651176 ~ 19658477 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other upstream 1470670 19618881 ~ 19633150 (+)
G142172 NA other upstream 1566729 19535693 ~ 19537091 (+)
G142078 NA other upstream 2411616 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 3378439 17721244 ~ 17725381 (+)

Expression


Co-expression Network