G142725



Basic Information


Item Value
gene id G142725
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22828072 ~ 22828460 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU179532
gggcagccagtgaagagaagccaatactcgagtgatgtgttcatgtttttttgtttttgttaggattcttgcagcagcattttggactaactgaagtgcagaaatagctctgtttgtgctgcctgacagaatggcattacagtaatccaatctagatgtaacaaatgcgtgtatcaatttctcagtgtcctgtaacgagaggaattgtcttagtctagcaatgtttctaagctggaggaaggaagatctcgacacattctgaatgtgtgattcaaaagatagattatgatcacagatgacacccaggtttcatgccatctccttagggaagaaattaaagttatcattactcagttttgttagtgcatgatgaacagttcgttttttgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU179532 True 389 lncRNA 0.39 1 22828072 22828460

Neighbor


gene id symbol gene type direction distance location
AMCG00003373 NA coding downstream 719990 22104127 ~ 22108082 (-)
AMCG00003367 LOC107084148,LOC107376893,LOC102788851 coding downstream 808058 21994244 ~ 22020014 (-)
AMCG00003365 NA coding downstream 837652 21968705 ~ 21990420 (-)
AMCG00003366 NA coding downstream 961487 21818186 ~ 21866585 (-)
AMCG00003369 NA coding downstream 1013288 21801030 ~ 21814784 (-)
AMCG00003375 NA coding upstream 3729 22832189 ~ 22833510 (-)
AMCG00003377 NA coding upstream 152040 22980500 ~ 22985638 (-)
AMCG00003376 NA coding upstream 157212 22985672 ~ 22986067 (-)
G142709 NA non-coding downstream 121561 22702582 ~ 22706511 (-)
G142665 NA non-coding downstream 733444 22091701 ~ 22094628 (-)
G142663 NA non-coding downstream 742881 22084918 ~ 22085191 (-)
G142661 NA non-coding downstream 758090 22066953 ~ 22069982 (-)
G142570 NA non-coding downstream 1065814 21762012 ~ 21762258 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 2951310 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 3258457 19543637 ~ 19569615 (-)
G141826 NA other downstream 6079641 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 7687253 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 8153652 14669415 ~ 14674420 (-)

Expression



Co-expression Network