G142727


Basic Information

Item Value
gene id G142727
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22893848 ~ 22894101 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179534
atacagagaagtacaaggcatcaatcattacaaattcaacttagctaaaacatagcaattcaaaataatacattttacaaattccaattacaatttacacaagtacagtaagtgacttcctacatcctggacggtgaaagctaagtgctgtcaagatgtagggttacagactagggctacaggaaagggagcaaggaggaaaacaatcaagaacgcgaggagcataataagctgaagtgctatctggCAGGGAt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179534 True 254 lncRNA 0.39 1 22893848 22894101

Neighbor

gene id symbol gene type direction distance location
AMCG00003374 NA coding upstream 177140 22711892 ~ 22716708 (+)
AMCG00003372 NA coding upstream 405937 22323832 ~ 22487911 (+)
AMCG00003371 NA coding upstream 749411 22134901 ~ 22144437 (+)
AMCG00003370 NA coding upstream 826534 22046313 ~ 22067314 (+)
AMCG00003363 NA coding upstream 1137914 21753346 ~ 21755934 (+)
G142724 NA non-coding upstream 65385 22828101 ~ 22828463 (+)
G142722 NA non-coding upstream 92788 22800852 ~ 22801060 (+)
G142690 NA non-coding upstream 187318 22648940 ~ 22706530 (+)
G142664 NA non-coding upstream 799100 22091701 ~ 22094748 (+)
G142620 NA non-coding upstream 899174 21991512 ~ 21994674 (+)
G142729 NA non-coding downstream 94 22894195 ~ 22894481 (+)
AMCG00003324 NA other upstream 3235371 19651176 ~ 19658477 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other upstream 3260698 19618881 ~ 19633150 (+)
G142172 NA other upstream 3356757 19535693 ~ 19537091 (+)
G142078 NA other upstream 4201644 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 5168467 17721244 ~ 17725381 (+)

Expression


Co-expression Network