G142729


Basic Information

Item Value
gene id G142729
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22894195 ~ 22894481 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179536
caggtcgttccaccacttaggggccagggatgagaaggagcaggctctggaggaaggagagtggagaggaggcagagttagccttctggcactggaggagcgcagtggtctggaagggatgtatggagagacgagtgactgaaggtagcttggtgcagtgtggtcaagacagcggtaggtgagggtcaaagtcttgaactgaatgcgtgccgctatcgggagccagtggagggagcggagcagtggagtagcgtgtgcgaatcgtggcagagagaataccagacgag

Function

NR:

description
PREDICTED: endothelial cell-specific molecule 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179536 True 287 lncRNA 0.58 1 22894195 22894481

Neighbor

gene id symbol gene type direction distance location
AMCG00003374 NA coding upstream 177487 22711892 ~ 22716708 (+)
AMCG00003372 NA coding upstream 406284 22323832 ~ 22487911 (+)
AMCG00003371 NA coding upstream 749758 22134901 ~ 22144437 (+)
AMCG00003370 NA coding upstream 826881 22046313 ~ 22067314 (+)
AMCG00003363 NA coding upstream 1138261 21753346 ~ 21755934 (+)
G142727 NA non-coding upstream 94 22893848 ~ 22894101 (+)
G142724 NA non-coding upstream 65732 22828101 ~ 22828463 (+)
G142722 NA non-coding upstream 93135 22800852 ~ 22801060 (+)
G142690 NA non-coding upstream 187665 22648940 ~ 22706530 (+)
G142664 NA non-coding upstream 799447 22091701 ~ 22094748 (+)
AMCG00003324 NA other upstream 3235718 19651176 ~ 19658477 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other upstream 3261045 19618881 ~ 19633150 (+)
G142172 NA other upstream 3357104 19535693 ~ 19537091 (+)
G142078 NA other upstream 4201991 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 5168814 17721244 ~ 17725381 (+)

Expression


Co-expression Network