AMCG00003399


Basic Information

Item Value
gene id AMCG00003399
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 671361 ~ 802713 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003399
atgatgagtgaaattaaaTCTGGACATAAGGAGCTGTTGTTCACAACGAGGGAGTGGAATCAGTTGCAGGAGTTGGTGGACATCCTGAAGCCGTTTGCAGAAGCAACAGATTTGACCCAGGGGGAGAGGATGGTTACCATCAGCTCTGTTGTTCCCTCTGTTTTTGCTCTGAATCACCACTTGGAGAAGCTGAAGTCTCAGTGGGTGGTACACCATGTACTTGTCAACCCTGAAGTCAAGGAAGTGCTTACACAAGGAGTGAAGGACCCTGCGGTTCATGGAAGGAAACTTATTGTTATTTCAAACTTGGATTCACCACACTGGATATCACTTGTCGGAGCGCGCATCAAGCTGGACCTGGCTGCCCAGGATGACCAGGGTGGCCCTTTTGCCCAGGTGAACCTGGGATTCCTGGATTCCCACTTGGTCCTCTTGACCCTGGTATTCCACTTTCCCCTCTTGGCCCTGGTTCTCCCCTCTGCCCTGGACCAGGAAGTCCTGGAGCACCATTTTCTCCTGGCTTTCCTATACCTCCAGGCCCAGGAGGTCCGGACAGGCCTTTTGGTCCAGGCATACCCATGGGTCCTGGAGCCCCATCTAGTCCTGGCATTCCCTGCTTCCCTGGCTCCCCTGGGAAGCCAGATCTGCCAGGGCCTGGTTGGCCAGGAGCACCTGGATTTCCTTTGGCACCTTGTTCCCCTTGAGCCCCTGGTTGGCCTGGTTGTCCATGTGGCCCTGGTTTGCCAGGAGCAGAGATGCCCGAAGGTCCTGGAATCCCAGGGGATCCAGGCATGCCCCTTGGACCTTGATGACCAGGAGTCCCTGGATCGCCTTTTTGACCAGGAACTCCCCTCTCCCCAGGTTTTCCTGGTGACCCTGGCATGCCTGCCTTGCCGGGAGAAGAGTATCCTTGTGGTCCAGGGGGCCCAGGTGGACCTTGTGGTCCTGGCATCCCATAGCCACCCTTCCCTGGGGGCCCGGGGGGGCCAGATTAGACAGGAGGTCTTAGTACTAGAAGTCGGGGACCAGcGACAAACATCAGAGGGATGTCCCACCCCGGCTCGTGAACTGAACCAGTCAGAGCTGAGGCTGCGGCTGAAGAGAGTGCTCAGCAACAACAAACCCTGCAGACGCTGGTCCAGCAACTTCAGGTGCGAACTCCTGCACCTGTCCCTGCTGTGGCCGCAGCGAACCCGGCTTGGGCTGGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003399 True 1212 mRNA 0.57 10 671361 802713

Neighbor

gene id symbol gene type direction distance location
AMCG00003394 NA coding downstream 7085 660528 ~ 664276 (-)
AMCG00003393 NA coding downstream 43671 619566 ~ 627690 (-)
AMCG00003392 NA coding downstream 74183 594275 ~ 597178 (-)
AMCG00003391 gpr63,LOC106571327,LOC106607724 coding downstream 131620 538794 ~ 539741 (-)
AMCG00003390 NA coding downstream 430848 232621 ~ 240513 (-)
AMCG00003401 NA coding upstream 116599 919312 ~ 930578 (-)
AMCG00003402 NA coding upstream 265326 1068039 ~ 1216767 (-)
AMCG00003403 NA coding upstream 441841 1244554 ~ 1246054 (-)
AMCG00003404 NA coding upstream 451156 1253869 ~ 1254981 (-)
AMCG00003407 nmbr,LOC106607916,LOC106571412 coding upstream 853672 1656385 ~ 1724582 (-)
G112 NA non-coding downstream 55041 614191 ~ 616320 (-)
G103 NA non-coding downstream 112627 519101 ~ 558734 (-)
G89 NA non-coding downstream 185461 485584 ~ 485900 (-)
G188 NA non-coding upstream 230947 1033660 ~ 1035682 (-)
G212 NA non-coding upstream 339525 1142238 ~ 1158563 (-)
G257 NA non-coding upstream 785104 1587817 ~ 1588261 (-)
G263 NA non-coding upstream 911864 1714577 ~ 1714856 (-)
G277 NA non-coding upstream 1023784 1826497 ~ 1830075 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other upstream 142510 945223 ~ 957196 (-)
AMCG00003423 NA other upstream 1594929 2397642 ~ 2401895 (-)
AMCG00003422 NA other upstream 1624684 2427397 ~ 2438821 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other upstream 2591944 3394657 ~ 3430272 (-)
AMCG00003444 NA other upstream 2733459 3536172 ~ 3538967 (-)

Expression


Co-expression Network