AMCG00003435


Basic Information

Item Value
gene id AMCG00003435
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 3213811 ~ 3217086 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003435
gacaagaatacattttgataaattataTCTCATGAGGAAATCTGTCAGTTTAATACCTGTCAGTATTTTGATGTAGTTATTGTTTCAGAGTGCTTTATTGGCCAGTCCCAGCATGCCCGTGTCCAGGCAGTGTGCAGCGCTGCTCATTGCAGTGGCTCTGCTGACGGTGGAGCTCGGTGTGGGGCTGAGTGCAGATCTCCAGACAAACACCTGCTCTGGATACCCAGGAATCCCAGGGACTCCCGGCAACAACGGAGCACCAGGGAGGGATGGGAGAGATGGGAGAGATGGGAAAGATGGCAGAGATGGAGgacagaaaggagagagagGTGAGAGGGGAGTCCAGGGTCCTCCAGGGAAAGCTGGTCCCATCGGTCCAGTAGGATTGAAAGGTGAAAAAGGTGAACAAGGACATCAAGGTGCAGCATTTGATCCAAGTCTCATTGCTAAATTACAGTCACAGGTTCAGACACTTCAAGGCAGTTTATCCAGACTTGAAAAAGctTCACAGTTTCTACTCTGGAGAAGAGTTGGCAATAAATACATGGTGTCCAATAAAGAACTTGGAAATTTTGACCAAGGCTTAAAGATCTGTGGTGATGCTGGTGCAAAAATGGCCACACCGAAAAACAAAGTGGAGAATGATGTTTTTTCAAAGTTCCTTGCAGAGTCTCAGACTGCTTACATTGGAGCAAATGATAGGAAGAGTGAAGGACGATTTGTAGATTTAGAAGAGAAACCCCTTGGATTCACCAAttggaaaagtggtgaaccgaaCAATCATAAAGGCAAAGAAGATTGTACTATTGTATTGAATGGACAGTGGAATGATGTATCATGTGAATCAAACTGTATGATAATTTGtgagttttaaaaaatacaaatacagatatCCACTGATATAATTTTTGTCTGGCAATTGCATCTActgtaattaacaaataattagTTTGAATCAAATTATAACCTAGtctatattattactatatatcactgtaaaatatattttgtgtattggGCTTTTACAACATGTTTACAgccatcaacaacaacaaactattaatataaaatagttcAATCACATCCAACTTTATTTGGACATTTGCACAAGAATATGAactgcaaaacataaaatgattgaaaataaacacaagatgTATGGAGGTGAGGAATATATTAGTAATTATCCTCCAGCCTGACTTCCAGAttacaaattgttttcttttctttaattgtctttatgTTAATTGTATACTACAGCAATAAGTGAGGAACTTCGCTCACCAAAGTTGCAGATTTAGACTGTGttcacattgttttacattaagtagtatattgtataaaaatatatctatttaaatatattgattaattaagttTGGATCTGACTCGTGTAGCTATAACAACATTACAGTGGTGCACAGCCTTTAAAGTAACTTCAGCAGATATGCAAAATGTTCAACAAGCACATAAGAAGTGAgaagctgttttattttgtcttgttgaTGTTCAATGACTACCTAATTACAGTAgctcatttttgttattttacctTTGTCTCGCTGTATGTAAATGCTGAATAACACAGTGAAGGGAACAGTATCTCTCTCTATGTTGAACTTGTTCTTACGGTGTGTTTATTGCTGTGTGAGTTTGGGGAAAAACAGCTTTTTCTATCTATCTTGCtagtaatgtaattgtaatcaatacatgtttattttgtctgtatttcgTTTACAGTGATCAATATAGatgctgaattttattttgctctgttGGTGTTCAAGGATTAGTATGTGTAAATCCATAAAACATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003435 True 1817 mRNA 0.37 4 3213811 3217086

Neighbor

gene id symbol gene type direction distance location
AMCG00003431 galnt14,LOC106607829,LOC106571428,LOC108429358,LOC107676246 coding downstream 487892 2674158 ~ 2725919 (-)
AMCG00003426 NA coding downstream 690486 2507558 ~ 2523325 (-)
AMCG00003424 NA coding downstream 797860 2408054 ~ 2415951 (-)
AMCG00003418 NA coding downstream 876751 2330695 ~ 2337060 (-)
AMCG00003417 NA coding downstream 910398 2295450 ~ 2303413 (-)
AMCG00003437 NA coding upstream 22798 3239884 ~ 3250722 (-)
AMCG00003436 NA coding upstream 72951 3290037 ~ 3291227 (-)
AMCG00003440 NA coding upstream 181640 3398726 ~ 3400684 (-)
AMCG00003439 NA coding upstream 187884 3404970 ~ 3415285 (-)
AMCG00003443 NA coding upstream 249716 3466802 ~ 3536015 (-)
G500 NA non-coding downstream 1934 3195905 ~ 3211877 (-)
G464 NA non-coding downstream 102760 3086465 ~ 3111051 (-)
G458 NA non-coding downstream 155607 3006968 ~ 3058204 (-)
G453 NA non-coding downstream 208130 3005372 ~ 3005681 (-)
G372 NA non-coding downstream 807727 2405643 ~ 2406084 (-)
G541 ccdc25 non-coding upstream 207002 3424088 ~ 3428291 (-)
G578 NA non-coding upstream 306938 3524024 ~ 3525095 (-)
G586 mtmr9 non-coding upstream 379835 3596921 ~ 3599589 (-)
G624 NA non-coding upstream 645911 3862997 ~ 3865429 (-)
G664 NA non-coding upstream 703910 3920996 ~ 3974710 (-)
AMCG00003422 NA other downstream 774990 2427397 ~ 2438821 (-)
AMCG00003423 NA other downstream 811916 2397642 ~ 2401895 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other downstream 2256615 945223 ~ 957196 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other upstream 177571 3394657 ~ 3430272 (-)
AMCG00003444 NA other upstream 319086 3536172 ~ 3538967 (-)
AMCG00003459 NA other upstream 659146 3876232 ~ 3895524 (-)
AMCG00003476 NA other upstream 1366056 4583142 ~ 4808989 (-)
AMCG00003484 NA other upstream 2126984 5344070 ~ 5356468 (-)

Expression


Co-expression Network