Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003440 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 3398726 ~ 3400684 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048593 | camera-type eye morphogenesis | biological_process |
| GO:0007634 | optokinetic behavior | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003440 | True | 489 | mRNA | 0.57 | 5 | 3398726 | 3400684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003436 | NA | coding | downstream | 107499 | 3290037 ~ 3291227 (-) |
| AMCG00003437 | NA | coding | downstream | 148004 | 3239884 ~ 3250722 (-) |
| AMCG00003435 | NA | coding | downstream | 181640 | 3213811 ~ 3217086 (-) |
| AMCG00003431 | galnt14,LOC106607829,LOC106571428,LOC108429358,LOC107676246 | coding | downstream | 672807 | 2674158 ~ 2725919 (-) |
| AMCG00003426 | NA | coding | downstream | 875401 | 2507558 ~ 2523325 (-) |
| AMCG00003439 | NA | coding | upstream | 4286 | 3404970 ~ 3415285 (-) |
| AMCG00003443 | NA | coding | upstream | 66118 | 3466802 ~ 3536015 (-) |
| AMCG00003449 | NA | coding | upstream | 308429 | 3709113 ~ 3714240 (-) |
| AMCG00003451 | NA | coding | upstream | 452463 | 3853147 ~ 3855295 (-) |
| AMCG00003461 | NA | coding | upstream | 691408 | 4092092 ~ 4120379 (-) |
| G500 | NA | non-coding | downstream | 186849 | 3195905 ~ 3211877 (-) |
| G464 | NA | non-coding | downstream | 287675 | 3086465 ~ 3111051 (-) |
| G458 | NA | non-coding | downstream | 340522 | 3006968 ~ 3058204 (-) |
| G453 | NA | non-coding | downstream | 393045 | 3005372 ~ 3005681 (-) |
| G372 | NA | non-coding | downstream | 992642 | 2405643 ~ 2406084 (-) |
| G541 | ccdc25 | non-coding | upstream | 23404 | 3424088 ~ 3428291 (-) |
| G578 | NA | non-coding | upstream | 123340 | 3524024 ~ 3525095 (-) |
| G586 | mtmr9 | non-coding | upstream | 196237 | 3596921 ~ 3599589 (-) |
| G624 | NA | non-coding | upstream | 462313 | 3862997 ~ 3865429 (-) |
| G664 | NA | non-coding | upstream | 520312 | 3920996 ~ 3974710 (-) |
| AMCG00003422 | NA | other | downstream | 959905 | 2427397 ~ 2438821 (-) |
| AMCG00003423 | NA | other | downstream | 996831 | 2397642 ~ 2401895 (-) |
| AMCG00003400 | abracl,LOC107727609,LOC107558932,LOC107553474 | other | downstream | 2441530 | 945223 ~ 957196 (-) |
| AMCG00003444 | NA | other | upstream | 135488 | 3536172 ~ 3538967 (-) |
| AMCG00003459 | NA | other | upstream | 475548 | 3876232 ~ 3895524 (-) |
| AMCG00003476 | NA | other | upstream | 1182458 | 4583142 ~ 4808989 (-) |
| AMCG00003484 | NA | other | upstream | 1943386 | 5344070 ~ 5356468 (-) |
| AMCG00003550 | NA | other | upstream | 5608433 | 9009117 ~ 9082850 (-) |
