AMCG00003461


Basic Information

Item Value
gene id AMCG00003461
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4092092 ~ 4120379 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003461
AGCTGCCAGAGAACTGGACGGACACAAAAGAGACCCTGTTGGAAGGCATGGTGTTCAACGTCAAGTACCTGGGTATGACCCTCGTGGAGCAGCCCAAGGGAGAAGAGATGGCATCGGCAGCCATCAGAAGGATAGTTTCCATGGGAATCATCTTGACAGACTCGGAAACAAATGAACTAATTGAAAACGTCTCCATATACAGaaTTTCCTACTGCACTGCAGACAAAGCTCAGGACAAGGTGTTTGCCTATGTTGCTCAGAGCCAGTTTAATGAGACGCTGGAATGCCATGCTTTTCTGTGCCCCAAAAAGAAGATCgcTCAGGCTGTGACGCTGACCGTTGCCCAGGCCTTCAAAGTGGCTCTGGATCTGTGGGAACTTGCTCAAGAAGACAAAAGCAAGAAAGTGCATCCGTGCTGCTCCTGCGCAGGAACAGAATCCAAGAGTGAACTGAAAAGCCACTGTGTTTCAGACCCTGAAATTAACAGAGGTCTAAGTAAAGAAGAAAACTTAAGGAAGCCATTTTTCTCTTCTTCGTTTCACACCACGTCACAGCACAACAGCCCTGTCCGGCGACCACCAATCAAACATGACTCATGGGATGTAGAAGATGGGCTAGATGATGCTTTCTCAAGACTGGCGGAGTCCCGGACCGGAGCGCAGTCTTAGGATGCAGCTCTGAAAACCTGCGGTGCCAATCGGACTAGCAAAGCAGCCATCTTGGAAACACGGACATGTCCCAGTGAAACACACGTGGACTTCTGAAATACAGGGACTCCGGTTTCTTTCAGTGGAAGGAAATGTCTTCGTTTCACGCAAGCAGTCGTCTCAATTACTCACGTCATCCAGGGTACAGGGATGTGGATTGGCACCATTTCTGGAACTGTCTCGCCCAAAACAAAGATCCCTCCAGTATTTTGTCTACATCTTCTACTAAACCATGGGATAAAAGGCACTGAATCAAAATACCTGAGGTATATGCGATGTTTGACTTTGTATTTACAATGTGTTTGCTTTTAGTTGTTATCTGTCATGAAAGCAATGCTGGGATCCATTACAATAATGTAGACCATCTAAATTGTGCCTCTTTTAGttgtacattaatttatttaattggtgCTTCCTCTTAAAAACAAAGGAATCTATTTGCAAGATTTCCTACTGTATTCTATGAAGCAGATTGTGATATGTTTGCCCCTTTGgtgcatttaatttaacatttttataatcaGCCATTGGACATTGTAGAGAAAATCAGTTTTCTGTGAAATGTACAGgatcttttagtttttcttaggAGATGCACATCAAATGTATCAATGTCTTGTTGCAGgggccattttgttttccattagtTTAACGCACCAAATGTCCAACCCAACAAACAATTGAATTGATGCATAGTCacaattaattcatatatatatatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003461 True 1435 mRNA 0.43 8 4092092 4120379

Neighbor

gene id symbol gene type direction distance location
AMCG00003451 NA coding downstream 236797 3853147 ~ 3855295 (-)
AMCG00003449 NA coding downstream 377852 3709113 ~ 3714240 (-)
AMCG00003443 NA coding downstream 556077 3466802 ~ 3536015 (-)
AMCG00003439 NA coding downstream 676807 3404970 ~ 3415285 (-)
AMCG00003440 NA coding downstream 691408 3398726 ~ 3400684 (-)
AMCG00003464 NA coding upstream 89368 4209747 ~ 4211902 (-)
AMCG00003460 NA coding upstream 97790 4218169 ~ 4235652 (-)
AMCG00003462 LOC108435005,LOC103398676,LOC105028620,LOC107697317 coding upstream 179526 4299905 ~ 4323978 (-)
AMCG00003466 snx17 coding upstream 256513 4376892 ~ 4404642 (-)
AMCG00003470 NA coding upstream 401169 4521548 ~ 4522998 (-)
G667 NA non-coding downstream 116103 3975757 ~ 3975989 (-)
G664 NA non-coding downstream 117382 3920996 ~ 3974710 (-)
G624 NA non-coding downstream 226663 3862997 ~ 3865429 (-)
G586 mtmr9 non-coding downstream 492503 3596921 ~ 3599589 (-)
G578 NA non-coding downstream 566997 3524024 ~ 3525095 (-)
G707 NA non-coding upstream 161446 4281825 ~ 4316284 (-)
G708 NA non-coding upstream 161770 4282149 ~ 4326850 (-)
G743 NA non-coding upstream 363137 4483516 ~ 4485565 (-)
G744 NA non-coding upstream 365228 4485607 ~ 4486026 (-)
G748 NA non-coding upstream 400436 4520815 ~ 4521017 (-)
AMCG00003459 NA other downstream 196568 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 553125 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 661820 3394657 ~ 3430272 (-)
AMCG00003422 NA other downstream 1653271 2427397 ~ 2438821 (-)
AMCG00003423 NA other downstream 1690197 2397642 ~ 2401895 (-)
AMCG00003476 NA other upstream 462763 4583142 ~ 4808989 (-)
AMCG00003484 NA other upstream 1223691 5344070 ~ 5356468 (-)
AMCG00003550 NA other upstream 4888738 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 5732820 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 5754291 9874670 ~ 9878444 (-)

Expression


Co-expression Network