Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003473 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 4452564 ~ 4455142 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060841 | venous blood vessel development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003473 | False | 300 | mRNA | 0.45 | 2 | 4452949 | 4453553 |
| TU878 | True | 382 | lncRNA | 0.35 | 4 | 4452564 | 4455142 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003467 | eif2b4 | coding | upstream | 17097 | 4427711 ~ 4435467 (+) |
| AMCG00003465 | NA | coding | upstream | 86332 | 4350519 ~ 4366232 (+) |
| AMCG00003463 | NA | coding | upstream | 162616 | 4280112 ~ 4289948 (+) |
| AMCG00003457 | fndc4,LOC107589087 | coding | upstream | 383502 | 4065461 ~ 4069062 (+) |
| AMCG00003458 | LOC107561937,LOC107746353,LOC107723530,LOC107589087,LOC107701471 | coding | upstream | 412562 | 4035185 ~ 4040002 (+) |
| AMCG00003474 | NA | coding | downstream | 16195 | 4471337 ~ 4471731 (+) |
| AMCG00003468 | NA | coding | downstream | 86501 | 4541643 ~ 4543761 (+) |
| AMCG00003475 | NA | coding | downstream | 234342 | 4689484 ~ 4695337 (+) |
| AMCG00003478 | LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 | coding | downstream | 719873 | 5175015 ~ 5187273 (+) |
| AMCG00003481 | NA | coding | downstream | 880349 | 5335491 ~ 5339847 (+) |
| G690 | NA | non-coding | upstream | 72745 | 4326653 ~ 4379819 (+) |
| G684 | NA | non-coding | upstream | 77625 | 4296559 ~ 4374939 (+) |
| G646 | NA | non-coding | upstream | 362245 | 4086896 ~ 4090319 (+) |
| G642 | NA | non-coding | upstream | 476525 | 3975753 ~ 3976039 (+) |
| G515 | NA | non-coding | upstream | 1086221 | 3339846 ~ 3366343 (+) |
| G742 | NA | non-coding | downstream | 28748 | 4483890 ~ 4484270 (+) |
| G752 | NA | non-coding | downstream | 97756 | 4552898 ~ 4553645 (+) |
| G907 | kbtbd11 | non-coding | downstream | 1095603 | 5550745 ~ 5556306 (+) |
| G908 | NA | non-coding | downstream | 1102465 | 5557607 ~ 5558515 (+) |
| G960 | NA | non-coding | downstream | 1374317 | 5829459 ~ 5829745 (+) |
| AMCG00003469 | NA | other | downstream | 58889 | 4514031 ~ 4522400 (+) |
| AMCG00003480 | NA | other | downstream | 848308 | 5303450 ~ 5334752 (+) |
| G1012 | NA | other | downstream | 2032550 | 6487692 ~ 6494905 (+) |
| AMCG00003524 | rps7,LOC107668222 | other | downstream | 3042898 | 7498040 ~ 7504015 (+) |
| AMCG00003534 | id2,LOC106566577 | other | downstream | 4193983 | 8649125 ~ 8652470 (+) |
