AMCG00003511


Basic Information

Item Value
gene id AMCG00003511
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7016952 ~ 7022585 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003511
GATATGAGACTGGTTTACTGCACAGGGTCCATGTGCGCCAGCCGCTCAGCTCTGTTGATAAACTCTCTGCAATGGCCGAACAAGAAGAGCAGAATGTTGCTTCTGTTCCAATCGATGGAATTAGCAACATGAAGATCACATCTGTTTGGACATTCTTGCTCTCCGTGCAGTGGTCTGAAGCCTGGCTTGTCGGGCTCTTGCTGTTTCATGTCGCATGCTTCGTCATCACCATTGTGACATTTAGGTTTTACAGACTGCAGATATTTCACTTCCTAATGATGGGTGAGTTATATTCTAAGTACCAGTACTTTGATTCAAGAGGAATGTTCATCTCGTTGGTGTTTTCAGCTCCTCTCTTGCTgaacactattattattgtgGTTCTGTGGGTCTATAGGGCATTTGCAACAATGACTGAGCTGAAGACACTACAACTCAAACGTAAAGCAAAccgagaaaagagagagaaaactgaaTAGTTTTTAAAGACCAGAagaattagttttattttcaacattccTCCAAGTTTAAAGAagacaagcaagcaaacaaacaactaaaagCTTAAGAGACAGTTGATAAAACTTGAATAACTGCTTGTGGACTTTAGGTGCATGTTTGTTACTgttcaaatacataaatcaccGTTTTAATCCTTGATCAAAACTTCTGCCATAAAACACTGTCTGCAAATTCCATTTTGATTTCCTAGTATAAATAGTATTGAGGGGAAACATTTAGAACACATTTTGGGAAGCTATTGGgacctatttttatttatttattaataatgggCTATTTTACATGGTTATATAATTACTTGTAttcttttggttttattgatCTAGAGTACTGCCGCATAGTTACTTATAGCAGCAGtgattacaattaaatttaccggggaatacatttatttgaattgttctTTAACTAAATCAAAGGATGTGTAAAGCTTATATGCATGTtcaactttgttttcttttctacatGTGAAATATAGGAGTAACACAGAAGAAGCCATTGTCTTTCTGTTTAAccaatacatgcatacattgaaTGGTGTTTATGGGAGGCATACAGTGGTTTAGTTTATCATgttcataatgttttatttttagacaaaAGACAAGAAACGGTCACTGGTTAAAAGAAAGTGTGAAGTTCAGCACATAAATTAAGCCCATAAATCACATTTCCTAGGTAGGTGTGTTTGAGTTGTGTATTCAAGACCATGGAAACGATGTAATTCTGTTATTTACTGCAAACTGTATAGCTTGTAATATTTTACCAGGTCACCTGACTCTCCTTATTTAAAGACCGTTTGAAATGTCCATGTAGAGGACACcatgtaaatattgtatgtataaagGGTGGTCTATTTCAGGGAAAGGGGGtgcaaaaatgtaatactaaGCATATTAAGTGAAGGtgtgtcatttttaatgtaattttaaagaacatttatttgttaGAGACCTTCCTGGTTTAATCATTAACACTAAATAAAGGTTACAAACCCAAAGAGCCAATGGAACTCAAGGCACAAAACACTTCGAGAGAGGTCAGGTACCACACAGAATTGCTCATAAATAGCAGAATTGTGgaatttcagtttttccacTGGAGGGAGCCAATgtctcattaaattaaatgaaactacAAGGATGGGGTTGCATATTAAAGTTGTTCAAATTATAAATCTGTTGCAGGTTCTTCCcccaattaaataacatttccc

Function

GO: NA

KEGG:

id description
K22145 TMEM18; transmembrane protein 18

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003511 True 1738 mRNA 0.36 4 7016952 7022585

Neighbor

gene id symbol gene type direction distance location
AMCG00003512 NA coding downstream 85846 6930769 ~ 6931106 (-)
AMCG00003509 NA coding downstream 145877 6827926 ~ 6871075 (-)
AMCG00003508 sh3yl1,LOC107674108,LOC107733179,LOC107594817 coding downstream 212062 6803200 ~ 6804890 (-)
AMCG00003503 NA coding downstream 289350 6704816 ~ 6727602 (-)
AMCG00003504 NA coding downstream 316421 6696955 ~ 6700531 (-)
AMCG00003510 NA coding upstream 500 7023085 ~ 7035616 (-)
AMCG00003514 NA coding upstream 31208 7053793 ~ 7057307 (-)
AMCG00003515 pxdn coding upstream 64055 7086640 ~ 7135114 (-)
AMCG00003517 NA coding upstream 145242 7167827 ~ 7208968 (-)
AMCG00003518 NA coding upstream 198903 7221488 ~ 7227518 (-)
G1117 NA non-coding downstream 165193 6841769 ~ 6851759 (-)
G1114 NA non-coding downstream 191236 6818657 ~ 6825716 (-)
G998 NA non-coding downstream 729412 6287328 ~ 6287540 (-)
G993 NA non-coding downstream 1029977 5986565 ~ 5986975 (-)
G982 NA non-coding downstream 1061633 5955104 ~ 5955319 (-)
G1147 NA non-coding upstream 50816 7073401 ~ 7073614 (-)
G1196 NA non-coding upstream 342382 7364967 ~ 7365277 (-)
G1238 NA non-coding upstream 468696 7491281 ~ 7491480 (-)
G1228 NA non-coding upstream 476848 7499433 ~ 7504188 (-)
G1252 NA non-coding upstream 766088 7788673 ~ 7788914 (-)
AMCG00003484 NA other downstream 1660484 5344070 ~ 5356468 (-)
AMCG00003476 NA other downstream 2207963 4583142 ~ 4808989 (-)
AMCG00003459 NA other downstream 3121428 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 3477985 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 3586680 3394657 ~ 3430272 (-)
AMCG00003550 NA other upstream 1986532 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 2830614 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 2852085 9874670 ~ 9878444 (-)
AMCG00003587 naa20 other upstream 3602761 10625346 ~ 10633112 (-)
AMCG00003586 NA other upstream 3928499 10951084 ~ 10956353 (-)

Expression


Co-expression Network