AMCG00003514


Basic Information

Item Value
gene id AMCG00003514
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7053793 ~ 7057307 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003514
GGGTCCTTCCCGAGAACACATAAATACCACGGTGGAAAATCTTCCTTCACACAAAACTGCACCCGATCCTCACGCGCACAAGTTCAAAATGAACAGAATGATACTTGAAgctgctgctgtatttattatgggcaatgtattttatttccttggcTACCTCACCCCAGCTCTTATCATGATCCCAATCCTGGTCTTTCTCCTGACTCATACTGAACACTATATGTTCAACCCGCAAGGCAGAGCTGTGTTCATCACTGGCTGTGACAGTGGATTTGGATACAATCTTGCAAAGCAACTAGACAAAATGGGATTTGTAGTATTCGCTGGCTGTCAGTTCCCCAACAGGGAAGGAGCCTGTAATCTTGTGAGAGAATGCTCCAGTTCCTTAAAGGTCATTGAATTAGATGTTACTCAAGAGGAAAATGTCAAACAGGcaaagaaatacattgaaacaaacTTGCCGGAGAAAGGCCTCTGGGGTGTAGTAAACAATGCAGGGATTTCTGACTGGTCAGAAACTGAATGGAACACTATGGCAGATTATCACAAAATGGCAGACGTGAATTTGTTTGGAAGCATCAGAACCACTTTGCCATTTATCCCGCTAATTCGGGCAACAGAAGGCCGCATCGTGTTTGTGTCCAGTATTTTCGCTTTTCTCCATGCGCCAAACATGGGTCCATACAGTGTAACTAAAAGAGCAATAGAAGCTTTTGCTGACTGTTTAAGGATTGAAATGGCCAGCTTTGGCGTGAAGGTCAGTATTATCCAACCGGGCAACTTTGGATCAGTGACCAATATTCTGAAAGAGAAAACGGCTGATGAGATCTGGAATAAGTTTGATGAGGCACAACGACAGACATTTAATAGACAATATATTGAATTGGTTAGTGAATATATTAACACACAACTAAAGGATGGAGTTAAGGATATTAATTTAGTGATAGATGTCATGGTAGATGCTCTTGTATCTCCTCGACCCAAAACTAGATACCTAGTTACAACCCTATTTGATAAGGTATTCTTCTGTAGCTTTCCATACTTGCCTACCTATCTTGCAGATACTGTGTTTACTTTAAGTGACATGTACCGGAAAAGAAAACAGTTGCTCTACAATTCAATCAACACTTGCAATTAACTCCCCTGTTTTCATTGGTCAGTAATaccaaaatgatttaatagtAAAATGCTAACTGGTTGGTTTTACACTAATACAGTCAggtaataacacatttaattacataaatattgtgATGGATCAAAGTTGTATTAGAAATTAACTTGTAGCTGAGTGTGAGGCTTAAACAATAAGTTCAAATACTTTACCAAGAGAGTGGGTTCTTTTCAACCTTAAATAACTCCCACTGAATATCTGGATTATAACATCTGGTTATTTTTAGACAACAATGTATTGCCTTTTCTGTTACATTAAAGGGCAGAAATATTTGTTCTTATTAATTTCTTTCAACATGGAGCATGTACATTTCAAACTCACCAAGATTTGACATTTGACAATTGCACATTCAACACTTTCGAACAGAATAACGTAAATAATCAAAAGACCCAGAATCAGAAGACACATGTACCACCTGTTTATTTTAGTACATTATAAAGCATAAACATCTATCCTTAACCCTCGGATACTGTTTTTAATCCTAAAATGTATCTTGCTGCCGACTTATAAAGAAAGATGTTTTACCAGGCCCTTCCCTTGTCCTTTGCCTGTGGACTTTTTCTCCAACTCCATGGCTGTGtaacaaatcacacatttgctccctacaccctgtACACTTGTCGAACACTTgtgtgacgttgtgctgacgtctGAGAGTGTGTACTTGggtgaggagggtgtagggtgcAATGCAAAGCAAAAAGCGTTAAATGAGACACACTTTAGCGTCGGCATTCAGCACCTTTGCCTTTGACTGAGAAAGTACCTACACAATCTTTCCTTGTCAGATTGAAGTTTTAAAGAATGGAGACTGCTATAGCATTTCAAGGATTTCGACAAGTAattgtacaatatataataataatacaaataataataatgtggaaatATATTGTTCGTTTACATCACCTCCTAATTTTATACT

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003514 True 2099 mRNA 0.38 4 7053793 7057307

Neighbor

gene id symbol gene type direction distance location
AMCG00003510 NA coding downstream 18177 7023085 ~ 7035616 (-)
AMCG00003511 NA coding downstream 31208 7016952 ~ 7022585 (-)
AMCG00003512 NA coding downstream 122687 6930769 ~ 6931106 (-)
AMCG00003509 NA coding downstream 182718 6827926 ~ 6871075 (-)
AMCG00003508 sh3yl1,LOC107674108,LOC107733179,LOC107594817 coding downstream 248903 6803200 ~ 6804890 (-)
AMCG00003515 pxdn coding upstream 29333 7086640 ~ 7135114 (-)
AMCG00003517 NA coding upstream 110520 7167827 ~ 7208968 (-)
AMCG00003518 NA coding upstream 164181 7221488 ~ 7227518 (-)
AMCG00003520 tssc1 coding upstream 323791 7381098 ~ 7407614 (-)
AMCG00003519 adi1,LOC102789913 coding upstream 363749 7421056 ~ 7446873 (-)
G1117 NA non-coding downstream 202034 6841769 ~ 6851759 (-)
G1114 NA non-coding downstream 228077 6818657 ~ 6825716 (-)
G998 NA non-coding downstream 766253 6287328 ~ 6287540 (-)
G993 NA non-coding downstream 1066818 5986565 ~ 5986975 (-)
G982 NA non-coding downstream 1098474 5955104 ~ 5955319 (-)
G1147 NA non-coding upstream 16094 7073401 ~ 7073614 (-)
G1196 NA non-coding upstream 307660 7364967 ~ 7365277 (-)
G1238 NA non-coding upstream 433974 7491281 ~ 7491480 (-)
G1228 NA non-coding upstream 442126 7499433 ~ 7504188 (-)
G1252 NA non-coding upstream 731366 7788673 ~ 7788914 (-)
AMCG00003484 NA other downstream 1697325 5344070 ~ 5356468 (-)
AMCG00003476 NA other downstream 2244804 4583142 ~ 4808989 (-)
AMCG00003459 NA other downstream 3158269 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 3514826 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 3623521 3394657 ~ 3430272 (-)
AMCG00003550 NA other upstream 1951810 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 2795892 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 2817363 9874670 ~ 9878444 (-)
AMCG00003587 naa20 other upstream 3568039 10625346 ~ 10633112 (-)
AMCG00003586 NA other upstream 3893777 10951084 ~ 10956353 (-)

Expression


Co-expression Network