AMCG00003525


Basic Information

Item Value
gene id AMCG00003525
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7518051 ~ 7531125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003525
ATGGCAACTCGGACCCCTGCAAACAAAGCCACTGATCAGCCGCAGtttctacatttaaataatctagCTTGTGAGGCAGCGGGAGGAAAGgttcTTTTTGCTACAGATGAATGGTTTGCATCTGCACAAAACCTTTTAAAGAGAGAGCCAGTGGAGTTTAAAGTGGATGCTTTCACACAGTTTGGTAAATTGATGGATGGCTGGGAGACAAGGAGAAAGAGAATTCCTGGTCACGACTGGTGCATAGTTCAACTGGGTGTCCCTGGAATCGTTCAGGGATTTGATATCGACACATCCTATTTTACAGGAAACTATGCCCCATCTGTCTCCATTCAGGCAGCTTCTTTGAATCAAGATGAGATTCCAGCTTTCAAACCTCAAGGGGATCGGACAGGAACAGCTGCTTCAGAAGAAGAGTTTAAAGCTGCTGCAAAgCTACACTCTGAATGCTGGGAGGAGCTGGTTCCAGTTTCACAGCTGAAGCCTGGCTATGTTGACACTTGTCATAATTACTTTTCTGTAAACACCCAACAGAGGTTCACTCATATTAGACTCAACATGTATCCAGatGGAGGAATTGCACGCCTAAAAGTATATGGCATTGGACAGAGAGATTGGTCTGTAGTATCCTATAATGATCACGTGGACTTGGTAGCACTGACAAATGGAGGAGTGTGTGTGGGATACAGTGATGCTCATTTTGGTCACCCACGCAATATGATAGGATTAGGAAGGGCTATAAATATGGGTGATGGCTGGGAGACTGCCAGACGACTTGACCGGCCAGCAATTTTAAAGGTGGATCATAAAGGTATACTACAAGTGCCGGGCAGCGAATGGGCTGTTTTTAAACTGGGCCACCCTGGGAACTTTCCAGACTCCTGTAAAATTGAGGGATGCACCTTGGCACCAGAAGAAGAGAATGAATACATTAGCGTGAAATGGAAAGCAGAGTGGAAGATTCTTCTGCCACCTCAGAAGctCAAACCCCATCACAGACACTTCTTCTCTGCTACCTCAATAGAGCTGACTGAAATTGTCACTCACGTGCGTCTCATTATTGCTCCTGATGGTGGAATAAGCAGGATGCGCCTGTGGGGATTCCCAAGGGCTCTGTCTTCATAA

Function

GO: NA

KEGG:

id description
K01477 alc, ALLC; allantoicase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003525 True 1125 mRNA 0.46 11 7518051 7531125

Neighbor

gene id symbol gene type direction distance location
AMCG00003521 NA coding upstream 3641 7505463 ~ 7514410 (+)
AMCG00003527 NA coding upstream 35845 7466921 ~ 7482206 (+)
AMCG00003529 NA coding upstream 58575 7453411 ~ 7459476 (+)
AMCG00003522 trappc12 coding upstream 79604 7422803 ~ 7438447 (+)
AMCG00003523 NA coding upstream 107922 7408545 ~ 7410129 (+)
AMCG00003526 NA coding downstream 1428 7532553 ~ 7547554 (+)
AMCG00003530 LOC108258189,LOC103368564,LOC106533618 coding downstream 447650 7978775 ~ 7980197 (+)
AMCG00003532 rsad2 coding downstream 753702 8284827 ~ 8292218 (+)
AMCG00003533 rnf144a,rnf144aa,LOC107752753,LOC106610698 coding downstream 785913 8317038 ~ 8337650 (+)
AMCG00003535 NA coding downstream 1288287 8819412 ~ 8842419 (+)
G1218 NA non-coding upstream 28170 7489445 ~ 7489881 (+)
G1187 NA non-coding upstream 152574 7364944 ~ 7365477 (+)
G1146 NA non-coding upstream 444442 7073404 ~ 7073609 (+)
G990 NA non-coding upstream 1531657 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 1562231 5955604 ~ 5955820 (+)
G1253 NA non-coding downstream 265326 7796451 ~ 7796854 (+)
G1271 NA non-coding downstream 744637 8275762 ~ 8276983 (+)
G1291 NA non-coding downstream 809141 8340266 ~ 8340592 (+)
G1303 NA non-coding downstream 912615 8443740 ~ 8444024 (+)
G1343 NA non-coding downstream 1129907 8661032 ~ 8666927 (+)
AMCG00003524 rps7,LOC107668222 other upstream 14036 7498040 ~ 7504015 (+)
G1012 NA other upstream 1023146 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 2183299 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 2995651 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 3062909 4452564 ~ 4455142 (+)
AMCG00003534 id2,LOC106566577 other downstream 1118000 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 1369331 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 1544765 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 1724703 9255828 ~ 9263468 (+)
AMCG00003570 NA other downstream 2246383 9777508 ~ 9781756 (+)

Expression


Co-expression Network