AMCG00003526


Basic Information

Item Value
gene id AMCG00003526
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7532553 ~ 7547554 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003526
ATGTCAGGCGTCACAGGTAGGGCGTCCGTCCCTCAGCCTCCACCGACCAAAACGGTCGTGATGTACCGCAACGGGGACGCTTTTTTCCCCGGGAGGAAGTTTGTGATCAACCAGCGACAGATGTCGACTTTTGACACATTTCTGAGCTCGGTGACCCAGCGAGTGGAGGCCCCCTTTGGCGCCGTGCGGAGCGTGTACACGCCGCGGGATGGGCACAGGGTGCGGGCCCTGGAGCAGCTGCGGCATGGCGAGGGATACGTGGCGGCAGGGGCGGAGCGCTTCAAGAAGCTGGAttacctTCAGATAACAGCCAAGAAACCCCAACCAAAGAAGAATGAGCAGGTAAGAGCTCGGATACTAATACCAAAATATACTCTAAGAAACTGGGATCGTGTGCTGGCCATGATAACAGAGAAGGTACACCTTCGCACAGGGGCAGTACACAGACTATGCACATTAGATGGGACCTCATTACTTGGTTCAATTGAGTTGGAAAATAACCAGTACTATGTTGCTGTGGGAGCTGAGAAATTTAAAGTCTTGCCATATTTTCAATGGGTGCCCTATAAAGGATCAATGAATGACACGGAGGGAAGTGTATTCAAAGCTAAAGACAAAAGGAAGGAAACTCAAGGAGCCACTGAAGTACAAGAAGACAGGCTTATGAAGGTGGACTTGCCTATTGATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003526 True 690 mRNA 0.51 5 7532553 7547554

Neighbor

gene id symbol gene type direction distance location
AMCG00003525 NA coding upstream 1428 7518051 ~ 7531125 (+)
AMCG00003521 NA coding upstream 18143 7505463 ~ 7514410 (+)
AMCG00003527 NA coding upstream 50347 7466921 ~ 7482206 (+)
AMCG00003529 NA coding upstream 73077 7453411 ~ 7459476 (+)
AMCG00003522 trappc12 coding upstream 94106 7422803 ~ 7438447 (+)
AMCG00003530 LOC108258189,LOC103368564,LOC106533618 coding downstream 431221 7978775 ~ 7980197 (+)
AMCG00003532 rsad2 coding downstream 737273 8284827 ~ 8292218 (+)
AMCG00003533 rnf144a,rnf144aa,LOC107752753,LOC106610698 coding downstream 769484 8317038 ~ 8337650 (+)
AMCG00003535 NA coding downstream 1271858 8819412 ~ 8842419 (+)
AMCG00003542 itgb1bp1 coding downstream 1410587 8958141 ~ 8959534 (+)
G1242 NA non-coding upstream 4095 7526859 ~ 7528458 (+)
G1218 NA non-coding upstream 42672 7489445 ~ 7489881 (+)
G1187 NA non-coding upstream 167076 7364944 ~ 7365477 (+)
G1146 NA non-coding upstream 458944 7073404 ~ 7073609 (+)
G990 NA non-coding upstream 1546159 5986038 ~ 5986394 (+)
G1253 NA non-coding downstream 248897 7796451 ~ 7796854 (+)
G1271 NA non-coding downstream 728208 8275762 ~ 8276983 (+)
G1291 NA non-coding downstream 792712 8340266 ~ 8340592 (+)
G1303 NA non-coding downstream 896186 8443740 ~ 8444024 (+)
G1343 NA non-coding downstream 1113478 8661032 ~ 8666927 (+)
AMCG00003524 rps7,LOC107668222 other upstream 28538 7498040 ~ 7504015 (+)
G1012 NA other upstream 1037648 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 2197801 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 3010153 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 3077411 4452564 ~ 4455142 (+)
AMCG00003534 id2,LOC106566577 other downstream 1101571 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 1352902 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 1528336 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 1708274 9255828 ~ 9263468 (+)
AMCG00003570 NA other downstream 2229954 9777508 ~ 9781756 (+)

Expression


Co-expression Network