AMCG00003565


Basic Information

Item Value
gene id AMCG00003565
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 9747764 ~ 9759310 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003565
CGCGCTGCGGGGCAGCCGGGGGAGCCGGGGCAGCCGGCCGGGCGCGCTGAGGAGATGGCTGGGCGCCGCAGGACCACGGGCTTGCATGTCGTGCTTGGACTGGGCTTTTATTTAACACTCGTCGGCCAAACGACTGGACAGCCTGGCAAAGTGTCATGGGAAGAAGAAAAGCTGTACCACAAAGCCAGCACCTTGAGCCCAAGTGATATAACCAGTGTCTTGTCCAACACGGATATTGAACAGATGTGGCAGAACGATCTGAAGCCCATGCTGGTCCAGAGATTCCCCAGTTCAGCCGGCAGCCTGTCTGTGCGCCAGCACATCCTGAAGAGGCTGAGGGCCCTCAAGGCAGGCTGGGACATGGAGGAGGATGAGTTCCAGGCCTACACGCCCTACGGAGCCCTGACTTTCGCCAACATCATCGCCACCCTCAACCCCTCAGCCAAGCGCCGCCTTGTGCTGGCCTGCCACTACGACTCCAAGTACTTCCCCCCGCAGTGGCACGGCCGTGAGTTCGTGGGGGCGACAGACTCGGCCACTACCAACCCTGACCTGTCAGTCCAGCTAATCTTCTTCGATGGCGAGGAGGCCCTGTACCACTGGACGTCCACAGACTCCCTGTACGGCTCCAGACACCTGGCCCAGAGGATGGAGAGCACTCCACACCCGCCCGGTGCCAGAGACACCAACCAGCTGCATGGCATTGACCTCTTTGTACTACTGGATTTGATTGGGGCTCCCAGTCCACGTTTTGGCAGCCAGTTTTCCAACACTGTCAGGTGGCTGACAAGACTGCAGAACATTGAGCGCCGGCTTCACGGGATGGGCCAGCTGAAGGACCATCCCACTGCGGTTGAGTACTTCTGGCCAAACCTGCCTGTGGGGCCCATAGAAGATGACCACAAACCGTTTCTAAACAAAGGGGTGCGTGTTCTTCACCTCATCCCCACTCCCTTTCCCGAGGTCTGGCACACCTTTGAAGATAACGAAGAGAACCTGGACAGGTCCTCCATTGAAAACCTCAACAAGATCCTTCAGGTCTTCGTGCTGGAGTACCTCAAGCCATAAAGGCTCAACAGGGCCAGGTCTTCACTGCCAGCCATAatttagcttttaaaaacatttgtactgGATTTGCTCACAGCGGTGGTGGTTTTGTTTCAAGACTATCCTAACAATCTTCAACCCATTCTTCTATTATAAGggatattgtactgtatttggtTTTGCAGTGGTTTCTTTAACTCGTCTTTGAACCTCGTTGTGAAGGGTACAGTTCTCCAGTCGTGACGTTGTGCTTACACAATGACAGAAGAAGACTGGAGTACGACAAATGGAGAATGACGTTTTCTAACCCCGTCCTCCTCAAAAGTGCTCTTTCACACGTTACATTTCAGATCTTTCCCTGTAGTTGGTCACTGTGGCAAGAAGTAATAtgaatcataataaaatgtgaaatgaga

Function

GO: NA

KEGG:

id description
K00683 QPCT; glutaminyl-peptide cyclotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003565 True 1463 mRNA 0.54 7 9747764 9759310

Neighbor

gene id symbol gene type direction distance location
AMCG00003566 NA coding downstream 9901 9701702 ~ 9737863 (-)
AMCG00003564 NA coding downstream 61470 9674652 ~ 9686294 (-)
AMCG00003567 scaf8,LOC107680102,LOC107728963,LOC107571060,LOC107749595,LOC107675315 coding downstream 91290 9636471 ~ 9656474 (-)
AMCG00003560 NA coding downstream 156293 9564652 ~ 9591471 (-)
AMCG00003561 NA coding downstream 192591 9543949 ~ 9555173 (-)
AMCG00003563 NA coding upstream 15586 9774896 ~ 9777368 (-)
AMCG00003574 pax1,pax1a,LOC100700371,LOC102791619,LOC107737274,LOC101466677 coding upstream 349328 10108638 ~ 10115106 (-)
AMCG00003578 xrn2,LOC106571262,LOC108229358,LOC104951730 coding upstream 477439 10236749 ~ 10272767 (-)
AMCG00003577 NA coding upstream 518930 10278240 ~ 10316839 (-)
AMCG00003579 LOC107197779 coding upstream 617533 10376843 ~ 10391035 (-)
G1492 NA non-coding downstream 567783 9174855 ~ 9179981 (-)
G1415 cpsf3 non-coding downstream 769915 8974810 ~ 8977849 (-)
G1405 NA non-coding downstream 783269 8957527 ~ 8964495 (-)
G1381 NA non-coding downstream 895323 8852197 ~ 8852441 (-)
G1374 NA non-coding downstream 906009 8841478 ~ 8841755 (-)
G1630 prkd3,LOC107098152,LOC106607674 non-coding upstream 91381 9850691 ~ 9851427 (-)
G1631 NA non-coding upstream 92759 9852069 ~ 9852338 (-)
G1744 NA non-coding upstream 655628 10414938 ~ 10415887 (-)
G1856 NA non-coding upstream 1290841 11050151 ~ 11051078 (-)
G1935 NA non-coding upstream 1622562 11381872 ~ 11386054 (-)
AMCG00003550 NA other downstream 664914 9009117 ~ 9082850 (-)
AMCG00003484 NA other downstream 4391296 5344070 ~ 5356468 (-)
AMCG00003476 NA other downstream 4938775 4583142 ~ 4808989 (-)
AMCG00003459 NA other downstream 5852240 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 6208797 3536172 ~ 3538967 (-)
AMCG00003572 NA other upstream 93889 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 115360 9874670 ~ 9878444 (-)
AMCG00003587 naa20 other upstream 866036 10625346 ~ 10633112 (-)
AMCG00003586 NA other upstream 1191774 10951084 ~ 10956353 (-)
AMCG00003595 myo6,LOC106571274 other upstream 1303811 11063121 ~ 11116905 (-)

Expression


Co-expression Network