Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003602 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 11371764 ~ 11372057 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003602 | True | 294 | mRNA | 0.60 | 1 | 11371764 | 11372057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003600 | NA | coding | downstream | 5164 | 11345944 ~ 11366600 (-) |
| AMCG00003597 | htr1b,LOC103360562 | coding | downstream | 121517 | 11249087 ~ 11250247 (-) |
| AMCG00003596 | impg1 | coding | downstream | 188087 | 11150069 ~ 11183677 (-) |
| AMCG00003592 | NA | coding | downstream | 374939 | 10970364 ~ 10996825 (-) |
| AMCG00003588 | tmem30ab,LOC107721815,LOC107658180,LOC107597847,LOC107714749,LOC108257743,LOC107664818 | coding | downstream | 408563 | 10957409 ~ 10963201 (-) |
| AMCG00003601 | NA | coding | upstream | 307 | 11372364 ~ 11378357 (-) |
| AMCG00003612 | NA | coding | upstream | 112953 | 11485010 ~ 11487557 (-) |
| AMCG00003610 | NA | coding | upstream | 156247 | 11528304 ~ 11542645 (-) |
| AMCG00003611 | NA | coding | upstream | 188505 | 11560562 ~ 11568281 (-) |
| AMCG00003613 | cnr1,LOC104936193 | coding | upstream | 203808 | 11575865 ~ 11577277 (-) |
| G1856 | NA | non-coding | downstream | 320686 | 11050151 ~ 11051078 (-) |
| G1744 | NA | non-coding | downstream | 955877 | 10414938 ~ 10415887 (-) |
| G1631 | NA | non-coding | downstream | 1519426 | 9852069 ~ 9852338 (-) |
| G1630 | prkd3,LOC107098152,LOC106607674 | non-coding | downstream | 1520337 | 9850691 ~ 9851427 (-) |
| G1492 | NA | non-coding | downstream | 2191783 | 9174855 ~ 9179981 (-) |
| G1935 | NA | non-coding | upstream | 9815 | 11381872 ~ 11386054 (-) |
| G2044 | NA | non-coding | upstream | 360747 | 11732804 ~ 11863101 (-) |
| G2052 | LOC100846954 | non-coding | upstream | 486864 | 11858921 ~ 11905671 (-) |
| G2066 | NA | non-coding | upstream | 654862 | 12026919 ~ 12027158 (-) |
| G2071 | NA | non-coding | upstream | 679188 | 12051245 ~ 12051491 (-) |
| AMCG00003595 | myo6,LOC106571274 | other | downstream | 254859 | 11063121 ~ 11116905 (-) |
| AMCG00003586 | NA | other | downstream | 415411 | 10951084 ~ 10956353 (-) |
| AMCG00003587 | naa20 | other | downstream | 738652 | 10625346 ~ 10633112 (-) |
| AMCG00003573 | NA | other | downstream | 1493320 | 9874670 ~ 9878444 (-) |
| AMCG00003572 | NA | other | downstream | 1506115 | 9853199 ~ 9865649 (-) |
| AMCG00003618 | NA | other | upstream | 371932 | 11743989 ~ 11789275 (-) |
| AMCG00003623 | LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 | other | upstream | 549934 | 11921991 ~ 11939783 (-) |
| AMCG00003625 | NA | other | upstream | 703262 | 12075319 ~ 12078152 (-) |
| G2236 | NA | other | upstream | 1662896 | 13034953 ~ 13035489 (-) |
| AMCG00003652 | parp1,xdh,LOC102777090,LOC107603072,LOC104966294 | other | upstream | 1699739 | 13071796 ~ 13116660 (-) |
