AMCG00003620


Basic Information

Item Value
gene id AMCG00003620
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 11839737 ~ 11840496 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003620
AAAACCCATATCTTGGTCACTGGTGTTACCCATGATGCAGAGCATGAGTTTTTACAGAGACTCCCAGGTTATCGGAGGCTTAAAAGGTTTAGTATGGTGGAGTGCACAGTGATCCTGGTCTTCTGTCCTGTTGCCTCTCGCATACAGACTGATATTGATAATTCCATTCAGGATATTCCAGtcAATAAGAAGGCCATTCTGGTGATGATGCACCACACTCACAACCCGGAGCTCGTTTTGGCTGAGAGCAGCTCTCTGGTGAAGAACAGGGCAAACATAGTGGGAACTGTGGACTGTCTGTTCCATGAGACTGTGGGATTACTGCAGTGTGGAGTCAACACCCAGGCTGTGAAA

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003620 True 354 mRNA 0.47 2 11839737 11840496

Neighbor

gene id symbol gene type direction distance location
AMCG00003621 NA coding upstream 11307 11824785 ~ 11828430 (+)
AMCG00003615 NA coding upstream 97099 11732555 ~ 11742638 (+)
AMCG00003609 NA coding upstream 280592 11542567 ~ 11559145 (+)
AMCG00003605 slc35a1,LOC106607707 coding upstream 312663 11519506 ~ 11527074 (+)
AMCG00003608 NA coding upstream 324258 11510405 ~ 11515479 (+)
AMCG00003622 NA coding downstream 11331 11851827 ~ 11856733 (+)
AMCG00003624 NA coding downstream 165940 12006436 ~ 12024934 (+)
AMCG00003628 NA coding downstream 292350 12132846 ~ 12144928 (+)
AMCG00003630 NA coding downstream 307144 12147640 ~ 12148899 (+)
AMCG00003634 NA coding downstream 1009637 12850133 ~ 12854702 (+)
G2018 NA non-coding upstream 8317 11813122 ~ 11831420 (+)
G1987 NA non-coding upstream 269327 11570052 ~ 11570410 (+)
G1902 NA non-coding upstream 436708 11331039 ~ 11403029 (+)
G1891 NA non-coding upstream 611462 11227959 ~ 11228275 (+)
G1855 NA non-coding upstream 789093 11050151 ~ 11050644 (+)
G2027 NA non-coding downstream 65487 11905983 ~ 11906188 (+)
G2042 NA non-coding downstream 185630 12026126 ~ 12028193 (+)
G2086 NA non-coding downstream 247041 12087537 ~ 12088986 (+)
G2125 NA non-coding downstream 379826 12220322 ~ 12259643 (+)
G2139 NA non-coding downstream 547107 12387603 ~ 12388058 (+)
AMCG00003614 NA other upstream 109746 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 262408 11573731 ~ 11577329 (+)
AMCG00003606 NA other upstream 348140 11490185 ~ 11491597 (+)
AMCG00003604 NA other upstream 356806 11461663 ~ 11482931 (+)
AMCG00003570 NA other upstream 2057981 9777508 ~ 9781756 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other downstream 1062070 12902566 ~ 12917002 (+)
AMCG00003648 LOC106571761 other downstream 1185073 13025569 ~ 13042597 (+)
AMCG00003655 xdh other downstream 1314564 13155060 ~ 13206839 (+)
G2440 NA other downstream 2578020 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 3011256 14851752 ~ 14866758 (+)

Expression


Co-expression Network