AMCG00003631


Basic Information

Item Value
gene id AMCG00003631
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 12156367 ~ 12176632 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003631
ATGTCTGTGGATGAGAAGCCTGAATCCCCCATGTATGTGTATGAGTCCACAGTTCACTGCACCAACATCCTCCTGTGCCTCAATGACCAGCGGAAGCAGGACATCCTCTGCGATGTGACCATCATAGTGGAGGGGAAGGAGTTCCGAGCTCACCGGGCTGTCCTGGCCGCCTGCAGCGAGTACTTCTTGCAGGTCCTGGTGGGACAGACCGAATATGAGCTGGTTATCAGCTTGCCCGAGGAGGTCACTGCCAGGGGATTCGGCCCTTTGTTGCAGTTTGCCTACACCGCTAAGCTGTTACTCAGCAGAGAAAACATCCAAGAGGTCATCCGCTGTGCGGAGTTCCTGCGCATGCACAACCTGGAGGACTCCTGCTTTCGCTTCCTGGAAGCCCAGCTCCTGAGCGAGGAAGACGGCCTGCTCCTGTGCAGCAAAGTGGCACCCTACCCGCAGTCCCAGGAAGATGACAACTCGGAGGCCGAGGATGAGAGCATGCAGTCAGAGACTACCAAGGTCACGTCTCCTAGGGCTCGGATGTGCGCAGAGGCCCTGGACTTCAACAAGTCATCCAGGCTGCTGGATGATGACAGGCTGGCCGTGCCGGTACCCGGTGGTTTCCAGGATGGCCAAGACTTTGATAAGCAAGGGGCGTCCGACCTTCCTCGCTGCccaaaatacaggaaatacCAGTGGGCCTGCACCAAGCACAATAATGACACATCCTCACACACCAGTACCTCAGGTTTTCCAAGCACATTCAAGGAAAGCAGCTCCATCGGCGGCAGCGACAGCAGCGACACCCTTGGGCAGGGGAGGCTGGCGGTGGGACAGATCAAAAACGAGCCGCGCACAGAGGACGAGACCATCTCGCTGTGCCTGTCGGGAGACGAGCAAGACATGAAAGAGAAAGACGGCATgacagagatggagatggaTGGGAAGCAGCACAGCCCCATGTATGTGGACAGACCTAAGAGCAAGTCTCCCACATGTTTAAGGTCCTTCTTGAAAAAGAGTATTGAACTGGTGAGCCTGCCAAATACATCACAGCAACTTTTTACCAACAGAATAGCCAGTCCCCAAGATAAAGGAGTAACTCAGGGTGACCACAAAAAGAACTATGGGCCTTTTACTGGGGAGTTGGGGCTACCTGTAGCATCTCCTAAGGAGGTTGAAGGTTTCCAAGTAGGATTATCGTTAAAGACCGCCTCTTGTGACGGGGTCTGCAAACAGGAGTCAGAGCTCGACCGCAGGAGTGTGATTTTTTCCTCAGGATCGTGCGACCGACTGGGAACTCCAGCGCATTCCTACCCTGGTGGGAACTCTTTGGATAAAGAACTCATAGAGCACATGCCAAAGAGCCTGTGGGCTGGTGCTAGCCAGTCCCTTCCCTGTTCCCAGACCTACTCCCCCAGTGGACTGCCCTCAGAGCCCATGCTGCAGTGTAGGTCACGCCCTAACACCAGCTGCCCAGTGCCAATCAAGGTGTGCCCCCGCTCTCCACCCTCGGAAACGAGGACCAGGACTTCAAGTTCCTGCTCCTCCTACTCCTACGCTGAAGATGGGAGTGGGGGTTCCCCCTGTAGTTTACCACAGTTCGAGTTCTCCTCCTCTCCGTGTTCCAATGTGACGCGATGCCTGACTGTCGAACAACAAGAGCAGGGGATGGTGGGGGATGCCATGTACAACCAGGCCCGACCCAAGATTAAATGCGAGCAGTCTTATGGCACCAACTCCAGCGACGAGTCTGGGTCTTTCTCAGAAGGAGACAGCGAGTCTTGCCATGTCCAAGAAAGAGGGCCAGAGgTCAAACTTCCTTTCCCTGTCGATCAAATCACAGATCTTCCACGGAATGACTTCCAAATGATgattaaaatgcacaaactaACCTCAGAGCAACTAGAGTTTATTCACGATGTGCGGCGAAGGAGCAAGAACCGCATTGCCGCGCAGCGCTGTCGCAAACGGAAACTGGACTGCATTCAGAACCTGGAGTGTGAGATTCGCAAACTGGTCTGCGAGAAGGAGAAACTGCTGACCGAGAGGAACCAGCTGAAGGCCTGCATGGGGGAACTGTGGGAGAACTTCTCCTGTCTGTCCCAGGAGGTGTGCCGGGATGTTCAGCTCAGCCCAGAGCAGATCCAGTCCCTGCACAGGTACTGTCCTGTCCTCCGGCCTGTGGATCAAGCTGCCACTGCCGCCTccaacaccaccaccagcatcaacctcacctcctcctcttcctcctcctcctcctccgccacGCCAGCTGGGACGGAACAAAACTTCAAGTCTCTGTGTGCCGGGGAAAGCATGCAGTGCTGCACTGACCCCGGCGCGGCTCAGCTGGGAGCGCAGTGGGTGCCGGGCAATGGGGCCCAAAGCTTAGCAGGGGTCACGATAGGAGAGCACGACCCTAGCACTTATCTTGAGGCAGGGGCCCCGTTTGAACAGTGCAACCAGACAGTCACGGTGGATTTTTGCCAGGAAATGACTGATAAATGTACAACTGACGAACAGCCCAGAAAAGACTGTACCCAGTAA

Function

GO: NA

KEGG:

id description
K09042 BACH; transcription regulator BACH

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003631 True 2544 mRNA 0.55 4 12156367 12176632

Neighbor

gene id symbol gene type direction distance location
AMCG00003629 LOC104963585,LOC104944503 coding downstream 25756 12079468 ~ 12130611 (-)
AMCG00003626 rragd,LOC107564985,LOC107693082,LOC107583676,LOC108435430,LOC107755772 coding downstream 179406 11958572 ~ 11976961 (-)
AMCG00003627 ube2j1 coding downstream 198713 11940494 ~ 11957654 (-)
AMCG00003619 LOC108427508,LOC101167911,LOC103355980,LOC108270165 coding downstream 278198 11866722 ~ 11878169 (-)
AMCG00003616 rngtt,LOC107554925,LOC107660510 coding downstream 435627 11707557 ~ 11720740 (-)
AMCG00003632 NA coding upstream 79837 12256469 ~ 12283492 (-)
AMCG00003638 epha7 coding upstream 406505 12583137 ~ 12595386 (-)
AMCG00003635 epha7,LOC107567608 coding upstream 442154 12618786 ~ 12624689 (-)
AMCG00003636 ttc13,LOC106571397 coding upstream 658885 12835517 ~ 12855317 (-)
AMCG00003640 NA coding upstream 681644 12858276 ~ 12860667 (-)
G2079 NA non-coding downstream 88109 12068049 ~ 12068258 (-)
G2071 NA non-coding downstream 104876 12051245 ~ 12051491 (-)
G2066 NA non-coding downstream 129209 12026919 ~ 12027158 (-)
G2052 LOC100846954 non-coding downstream 250696 11858921 ~ 11905671 (-)
G2044 NA non-coding downstream 293266 11732804 ~ 11863101 (-)
G2140 NA non-coding upstream 210976 12387608 ~ 12387931 (-)
G2142 NA non-coding upstream 241296 12417928 ~ 12418336 (-)
G2168 NA non-coding upstream 692869 12869501 ~ 12869951 (-)
G2196 NA non-coding upstream 721799 12898431 ~ 12901945 (-)
G2234 NA non-coding upstream 855296 13031928 ~ 13032764 (-)
AMCG00003625 NA other downstream 78215 12075319 ~ 12078152 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 216584 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 367092 11743989 ~ 11789275 (-)
AMCG00003595 myo6,LOC106571274 other downstream 1039462 11063121 ~ 11116905 (-)
AMCG00003586 NA other downstream 1200014 10951084 ~ 10956353 (-)
G2236 NA other upstream 858321 13034953 ~ 13035489 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other upstream 895164 13071796 ~ 13116660 (-)
AMCG00003667 NA other upstream 1488111 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 1832826 14009458 ~ 14013021 (-)
G2500 NA other upstream 2634154 14810786 ~ 14811331 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000325_03657039_03691049 BACH2B, BACH2 coding CI01000325 null 3656973 ~ 3691049 (-)