AMCG00003646


Basic Information

Item Value
gene id AMCG00003646
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 12905372 ~ 12906889 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003646
AATCTCTTTGCAGCTGCCTGGACCGCAAGCTCCCTGACCAATGTGTACAGCACTGGTGAGCTCCTCCACTTCCAGGCCAGGGGGTATCCAAAAGCTGAAGGAGAGCAGCTGTTCATTGGCTCCTGTTATGCAACACTGTCTGAATACCCTCAATCATTCCCCAAGTACATGATCATCGACCACTATGGCTGCATGAACCACAAGCTGGGAGCCAGTTCCAAGTTTCATCCACCCAGAGCAGATGGTGTCATCAACTTTGCTGTTGATGCAAGGGAGCTCAATCTTGTGTCCAAGATCTATATCCACTGTGTCCTGTTCCTCGGCATCCAGGGAACAACATTGCATACAAAATCTTGCAACTTTGACACCACAAAGCAAAGATGGGAAGCCCTTGAGCTTGTGGATGGTGTCTGTGACTGCTGTGACTCCAACTGTACTGCCCCACTCCTGACCTCCGTAACTACAGATCTTTGGAGCACTGGCCCCATATTGATCAAGGAAGGCACTGCAAGGAGGACTGCTTCTGCCAGGGATGGTGACCTCCTCTGGTTTCAGGTTAAAGGAGGTGATGCCTACCAGCAGGATGAGTATAATGGGGCCTATGAGGAGGAAGATGAGAATGACCATGACAGTGAATTTGGCAAGGATTATGAGGAGGAGGATGGTGCAGGGTGGGATGAAGCGCGAAggccggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggatgatgatgatgatgatgaagaccATGGAGTGGGGTGGGATGAAGAGCAAAGGCCAGATGAGGAGGGGCAGCATGAAGAGGATGAAGAGCAAAGACTGGATGAAGAGAACAGCGCAAGGTGGGatgatgaggaagaggaggggtgGCAGGCTGATGAGGATGAATCTGCTGATGAACCAGTGGCAGACTCCCTGGATGAGGCCATTGACCACCCGTTCTCCAATGATGCAAGCCTGGTGGATAATCCAAGGGAAGCATCTGGTACCAAGGTCTCCATGCTGGAAGTGGCTGAGACTGAAGCTCCCTCATTGGAGCTGGAGGGTTCTACA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003646 True 1122 mRNA 0.53 5 12905372 12906889

Neighbor

gene id symbol gene type direction distance location
AMCG00003644 NA coding downstream 14237 12883467 ~ 12891135 (-)
AMCG00003637 NA coding downstream 39619 12862807 ~ 12865753 (-)
AMCG00003640 NA coding downstream 44705 12858276 ~ 12860667 (-)
AMCG00003636 ttc13,LOC106571397 coding downstream 50055 12835517 ~ 12855317 (-)
AMCG00003635 epha7,LOC107567608 coding downstream 280683 12618786 ~ 12624689 (-)
AMCG00003645 NA coding upstream 19806 12926695 ~ 12968156 (-)
AMCG00003650 acbd3,LOC106571761 coding upstream 130803 13037692 ~ 13050392 (-)
AMCG00003651 lin9,LOC107678835,LOC107726751,LOC107697095 coding upstream 149105 13055994 ~ 13065554 (-)
AMCG00003662 xdh,LOC104966294 coding upstream 210477 13117366 ~ 13212180 (-)
AMCG00003660 NA coding upstream 310652 13217541 ~ 13233616 (-)
G2196 NA non-coding downstream 3427 12898431 ~ 12901945 (-)
G2168 NA non-coding downstream 35421 12869501 ~ 12869951 (-)
G2142 NA non-coding downstream 487036 12417928 ~ 12418336 (-)
G2140 NA non-coding downstream 517441 12387608 ~ 12387931 (-)
G2079 NA non-coding downstream 837114 12068049 ~ 12068258 (-)
G2234 NA non-coding upstream 125039 13031928 ~ 13032764 (-)
G2235 NA non-coding upstream 126350 13033239 ~ 13034060 (-)
G2257 NA non-coding upstream 170759 13077648 ~ 13080021 (-)
G2266 NA non-coding upstream 193623 13100512 ~ 13101318 (-)
G2285 NA non-coding upstream 224731 13131620 ~ 13143528 (-)
AMCG00003625 NA other downstream 827220 12075319 ~ 12078152 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 965589 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 1116097 11743989 ~ 11789275 (-)
AMCG00003595 myo6,LOC106571274 other downstream 1788467 11063121 ~ 11116905 (-)
AMCG00003586 NA other downstream 1949019 10951084 ~ 10956353 (-)
G2236 NA other upstream 128064 13034953 ~ 13035489 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other upstream 164907 13071796 ~ 13116660 (-)
AMCG00003667 NA other upstream 757854 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 1102569 14009458 ~ 14013021 (-)
G2500 NA other upstream 1903897 14810786 ~ 14811331 (-)

Expression


Co-expression Network