AMCG00003647


Basic Information

Item Value
gene id AMCG00003647
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13053429 ~ 13055181 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003647
ATGGCTTCAATGCACCAGAAGGTCCCGCTGGGAGATGCGCACAGCGGGGGCAGAGCTCagggggAAATGAATCCTGCGGCCGGCTCGTATTATGAAGCCCCAGGCGCCGCGTCTCACAGGGCGGACAGTCTGGCGCTGTTGACGCACCGCAGGAAGAGGACGCACTTCACGCAGCAGCACATCGAGGTGCTGGAGAAGGTCTACTGCTCCACCATGTACCCGGACATCTACCTCCGAGAGCGGCTGGAGGCGCTCACAGGCCTGCCCGAGTCCAGGATCCAGGTTTGGTTCCAGAATAGACGTGCAAAGTCTCGCCGCCAAGCAGGACCCTCACCTGCTCCTTCCAGGCAAACCCACCCCAATGGCAACCCTCCTGTGCCATTCGCTCAGCTCCAAAACCGAATGCCTCAAGACTTCTCAAGAAGGAACAGCTTTGCTTTGGCTTTCAGATCCCGGTCAGACAACTTGGAGGAGCAACCCCAGACACCAGAAGCCTTTAAGAGAACAGACTACCCTCCTCCAGTTTCTTGCCTTTATAACGAAGCAGGCGGTACCAGGAAAGCAGAACGGAAAACACAAGCAGTTAACAATAGCTGTACAGGACTGAGTGGTCTGATGCATTACCAAATGCACGGTGCCAATTTCTCAAAGTTGCAGGATGCTTCACAGAAACAGATCTTGGTGGACTACGATAACTTCCCACCCAACAAGACAATAGGACCCGAAATGAAAGTGGTGATTCCACCAATGCCGCCGTCCGTGGGTTTCAGCAGGTCTTCGCCCAAGAACAGTGCGCACGTAGTTCCACAGGGACCACAGCAGGACTCCAGTAATAAATACGCTTTGGGCCATTTCTCTCCCATCTCTAACGACAAGTCGAGAGAGAAGTTTTCCGATTCAGACTCGGACTGGGAAAGTGGAGCCATCTCCGAATTTGCCAGTTTGATGTAA

Function

GO: NA

KEGG:

id description
K24900 MIXL1; homeobox protein MIXL1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003647 True 951 mRNA 0.54 3 13053429 13055181

Neighbor

gene id symbol gene type direction distance location
AMCG00003649 ccdc28a coding upstream 29190 13020377 ~ 13024239 (+)
AMCG00003641 NA coding upstream 127373 12918837 ~ 12926056 (+)
AMCG00003642 NA coding upstream 151471 12891168 ~ 12901958 (+)
AMCG00003633 trim67,LOC106571401 coding upstream 173072 12872513 ~ 12880357 (+)
AMCG00003639 exoc8 coding upstream 184958 12866417 ~ 12868471 (+)
AMCG00003653 NA coding downstream 35912 13091093 ~ 13092094 (+)
AMCG00003654 cnih4,LOC106584110 coding downstream 186870 13242051 ~ 13246855 (+)
AMCG00003656 NA coding downstream 265022 13320203 ~ 13325222 (+)
AMCG00003666 NA coding downstream 682421 13737602 ~ 13744368 (+)
AMCG00003668 NA coding downstream 742098 13797279 ~ 13797599 (+)
G2139 NA non-coding upstream 665371 12387603 ~ 12388058 (+)
G2125 NA non-coding upstream 793786 12220322 ~ 12259643 (+)
G2086 NA non-coding upstream 964443 12087537 ~ 12088986 (+)
G2042 NA non-coding upstream 1025236 12026126 ~ 12028193 (+)
G2027 NA non-coding upstream 1147241 11905983 ~ 11906188 (+)
G2250 NA non-coding downstream 19507 13074688 ~ 13080021 (+)
G2264 NA non-coding downstream 43380 13098561 ~ 13101316 (+)
G2267 NA non-coding downstream 47276 13102457 ~ 13102666 (+)
G2281 NA non-coding downstream 172054 13227235 ~ 13228357 (+)
G2294 NA non-coding downstream 192128 13247309 ~ 13254443 (+)
AMCG00003648 LOC106571761 other upstream 10832 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 136427 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 1323438 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1476100 11573731 ~ 11577329 (+)
AMCG00003606 NA other upstream 1561832 11490185 ~ 11491597 (+)
AMCG00003655 xdh other downstream 99879 13155060 ~ 13206839 (+)
G2440 NA other downstream 1363335 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1796571 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 2245899 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 2969690 16024871 ~ 16039640 (+)

Expression


Co-expression Network