Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003649 |
| gene name | ccdc28a |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 13020377 ~ 13024239 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| ccdc28a | Predicted to enable guanyl-nucleotide exchange factor activity. Orthologous to human CCDC28A (coiled-coil domain containing 28A). |
| description |
|---|
| coiled-coil domain-containing protein 28A isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003649 | True | 1298 | mRNA | 0.44 | 5 | 13020377 | 13024239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003641 | NA | coding | upstream | 94321 | 12918837 ~ 12926056 (+) |
| AMCG00003642 | NA | coding | upstream | 118419 | 12891168 ~ 12901958 (+) |
| AMCG00003633 | trim67,LOC106571401 | coding | upstream | 140020 | 12872513 ~ 12880357 (+) |
| AMCG00003639 | exoc8 | coding | upstream | 151906 | 12866417 ~ 12868471 (+) |
| AMCG00003634 | NA | coding | upstream | 165675 | 12850133 ~ 12854702 (+) |
| AMCG00003647 | NA | coding | downstream | 29190 | 13053429 ~ 13055181 (+) |
| AMCG00003653 | NA | coding | downstream | 66854 | 13091093 ~ 13092094 (+) |
| AMCG00003654 | cnih4,LOC106584110 | coding | downstream | 217812 | 13242051 ~ 13246855 (+) |
| AMCG00003656 | NA | coding | downstream | 295964 | 13320203 ~ 13325222 (+) |
| AMCG00003666 | NA | coding | downstream | 713363 | 13737602 ~ 13744368 (+) |
| G2139 | NA | non-coding | upstream | 632319 | 12387603 ~ 12388058 (+) |
| G2125 | NA | non-coding | upstream | 760734 | 12220322 ~ 12259643 (+) |
| G2086 | NA | non-coding | upstream | 931391 | 12087537 ~ 12088986 (+) |
| G2042 | NA | non-coding | upstream | 992184 | 12026126 ~ 12028193 (+) |
| G2027 | NA | non-coding | upstream | 1114189 | 11905983 ~ 11906188 (+) |
| G2250 | NA | non-coding | downstream | 50449 | 13074688 ~ 13080021 (+) |
| G2264 | NA | non-coding | downstream | 74322 | 13098561 ~ 13101316 (+) |
| G2267 | NA | non-coding | downstream | 78218 | 13102457 ~ 13102666 (+) |
| G2281 | NA | non-coding | downstream | 202996 | 13227235 ~ 13228357 (+) |
| G2294 | NA | non-coding | downstream | 223070 | 13247309 ~ 13254443 (+) |
| AMCG00003643 | kif25,LOC100703631,LOC102203072 | other | upstream | 103375 | 12902566 ~ 12917002 (+) |
| AMCG00003614 | NA | other | upstream | 1290386 | 11725083 ~ 11729991 (+) |
| G1989 | cnr1,LOC104936193 | other | upstream | 1443048 | 11573731 ~ 11577329 (+) |
| AMCG00003606 | NA | other | upstream | 1528780 | 11490185 ~ 11491597 (+) |
| AMCG00003604 | NA | other | upstream | 1537446 | 11461663 ~ 11482931 (+) |
| AMCG00003648 | LOC106571761 | other | downstream | 1330 | 13025569 ~ 13042597 (+) |
| AMCG00003655 | xdh | other | downstream | 130821 | 13155060 ~ 13206839 (+) |
| G2440 | NA | other | downstream | 1394277 | 14418516 ~ 14419732 (+) |
| AMCG00003690 | NA | other | downstream | 1827513 | 14851752 ~ 14866758 (+) |
| AMCG00003702 | NA | other | downstream | 2276841 | 15301080 ~ 15318228 (+) |
