AMCG00003656


Basic Information

Item Value
gene id AMCG00003656
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13320203 ~ 13325222 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003656
GCAGGAGCAGCGCTGCTGACGTGTAGGTAAGGAAGTGCTTTCgccgggagagggagaggggatcTGCGCTGTTTTCGGCAGCCTGTGTGGTGGACTGGGAGAATCATGGGCAAGCGAAGGGTGCCAGACTTGTATCGTGCGCCCTTTCCTCTGTACACTGTGGGTGTGCACCGAGAGACTGGATTGGTCATCACTGCGGGGGGAGGTGGAGCATCCAAGACTGGCATTAAGAATGGGCTGCATTTCCTGCGCATGGAGAGGGTGGATGGTCAGCTCACTGCCTCACTGGCCCACTCCTTTGATACGGACCCTCGAGCCACCATGAGTCTGGCGTTAGGAGGTGATGTCATCGCAGCGGGACAGGATGCCAGCTGCCATCTCCTGCGCTTCAAGGAGCGGTCAGGCAAACCTCCAGGGAAAGGAGGAGGTGGGGATCAGGGAGTCCAGAGGAGGAAAGGGGGCCGTAGTCAGGCGGCGGGCGACGCAAGCCCAGAGACGCACAATGACACGACTCAGATCACCGTGGAGAGTGTGGGCGAGGTGCAGACGGACTTCAGCACCGACGCCCTGCAGAAGTGCGTGCGTTTCAGTGCCGACCTGAACTTGCTGATTACCGGAGGCGCCGATGGACATGTCCGAGTGTGGGAGTACCCCGCCATGAAAAAGAAGTTTGATTTCAAAGCGCATGAAGGTGAAGTAGAAGATTTAGATATCAGCCCTGATAACAAGCAGCTGGTGACAGTAGGTCGAGACTTCACCTGCTGCGTTTGGCGGAATGACCAACTGGCCACAGGACTGCGTTGGCATGAGAACATCCCCAACATCCCAGAGAAGATGTATCGCTACCAGGCCTGCAGGCAAGAGCTTGCATTCTTACATATCACATCACATGATACTTCTACATTTCTGTTTGCCAAGGTGGAAGACAAGGCAGAAGCTCTGCGCCTTTACACAGTCCAGATCCCTCACAAGCGGGACCGCCGGCCCCCGCCCTGCTACCTCACCAAGTGGGATGGGCGCAACTTCCTGCCTCTCCTCACACAGCCCTGTGGCAACGAAGTCATATCTTGTCTGGCTGTCAGTGATTCGGGGACGTTTCTGGGCCTAGGGACTGTGACAGGATCAGTGGCCATTTacatctccttctccctgcaAAAACTCTACTATGTCCAGGAAGCGCACGGCATTGTGGTCACAGACTTGGCTTTCCTGCCAGACACGCCGCAGGGCAGGACTGTGCTCGGAGACAATGAGATGGCTATGCTGAGCGTGGCGGTGGATAGCAGATGTAAAATGCACGTTCTTCCAAATCGAAAATCTTTCCCAGTCTGGCTGGTTCTCCTCCTCTGTGCTCTTATGGTCGTTGGTGTGATCTTCCTCCTGCAGCAAGCTTTCCCCGGGTTCATCTAGGCAGGACAGTGTCTCCTAGGGCTGCTCAGGAAGGGGGCGGGGTCTCGGACACGCCCCCCTCCCCACTTCTGCTCAGGGACCTTCGCTCCTAGAATGGATTGACCGCAACCAATCTGTCCAAAGAGAAGAGACTTAATGACACTTGATTCTGAAGGACACCTGTTCCGACCAAACACGCGATAGCTTagtgaattaaaacatattaaccGGAAGGATCTTGCGTTTGTCGCCAATATTGTGAACCGTTCCAGgcttttataaaaacattatttacattttatctattttttggggggaagaaaaggGAGAAGGGACTTGAGATAGTCACATGAATTTATATACGTTTGAGATCGAGATGCAGCAACGgaaaagcaaaagcaagaaAACCTGTGTATTGTGATCTGGACCTTTAATGGTGAAGGAAGATgaataaaaacttaaaaggtaatttttattccattttgaatgtgtattttaaacctgttttaATCCAATTACTGACCtgatgttatatatacagtctTAATGAAGTGGTGCTGTCAAAACTTTAGACACTGCCCTTCTGTGGGGCAGGATGGTGGAGATTTGCATTGCCGGTCGGGGACAAGTACACCTGTTTTGGGCTGGTGGGAGgtggc

Function

GO: NA

KEGG:

id description
K14003 PREB, SEC12; prolactin regulatory element-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003656 True 2048 mRNA 0.52 10 13320203 13325222

Neighbor

gene id symbol gene type direction distance location
AMCG00003654 cnih4,LOC106584110 coding upstream 73348 13242051 ~ 13246855 (+)
AMCG00003653 NA coding upstream 228109 13091093 ~ 13092094 (+)
AMCG00003647 NA coding upstream 265022 13053429 ~ 13055181 (+)
AMCG00003649 ccdc28a coding upstream 295964 13020377 ~ 13024239 (+)
AMCG00003641 NA coding upstream 394147 12918837 ~ 12926056 (+)
AMCG00003666 NA coding downstream 412380 13737602 ~ 13744368 (+)
AMCG00003668 NA coding downstream 472057 13797279 ~ 13797599 (+)
AMCG00003670 esrrga,LOC107582200,LOC107733169 coding downstream 684249 14009471 ~ 14013046 (+)
AMCG00003669 esrrga,LOC107719475 coding downstream 731229 14056451 ~ 14067694 (+)
AMCG00003673 NA coding downstream 766791 14092013 ~ 14190098 (+)
G2294 NA non-coding upstream 65760 13247309 ~ 13254443 (+)
G2281 NA non-coding upstream 91846 13227235 ~ 13228357 (+)
G2267 NA non-coding upstream 217537 13102457 ~ 13102666 (+)
G2264 NA non-coding upstream 218887 13098561 ~ 13101316 (+)
G2250 NA non-coding upstream 240182 13074688 ~ 13080021 (+)
G2323 NA non-coding downstream 89709 13414931 ~ 13415156 (+)
G2326 NA non-coding downstream 160370 13485592 ~ 13485807 (+)
G2329 NA non-coding downstream 182665 13507887 ~ 13509930 (+)
G2330 NA non-coding downstream 185016 13510238 ~ 13510674 (+)
G2331 NA non-coding downstream 186313 13511535 ~ 13511829 (+)
AMCG00003655 xdh other upstream 113364 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 277606 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 403201 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 1590212 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1742874 11573731 ~ 11577329 (+)
G2440 NA other downstream 1093294 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1526530 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 1975858 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 2699649 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 3707348 17032570 ~ 17042594 (+)

Expression


Co-expression Network