AMCG00003663


Basic Information

Item Value
gene id AMCG00003663
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13387807 ~ 13398847 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003663
GAGACAGGGCAGAACACACAGCGGTGCTGAACTACACTGCTCTTCCATCCTAGCCCTACTGTGACCGTGGAGCACACCGCGCATGCTCCGTGTCCGCCCGACACACGTGTACATGCGCGCAGCTCTTCCGGGTCGGACTGGCGATGGCCGCTGCTCACAGTCTGCACAGATGTGTAGTCTCGCAAAGTGGGAAACAGACGGCGTCAGTTTTCTTCCTGCACGGCTCAGGTGATACTGGGCCAGGCCTTCGAGAATGGGTCAGAGATGTGCTGAAACAAGACCTTGATTTCCCTCACATCAGGGTCATTTATCCTACGGCACCATTAAGGCCCTACACACCGATGAGAGGAGCTCCATCAAACGTGTGGTTCGACAGGCACAAAATATCCAAGGATTGTCCTGAGCACCTGGAATCCATTGAGTCTATGTGCCGCTCACTCAGTGGTCTGATTGAAGAAGAGGTCAAGGCTGGCATTCCCAAGGAAAGGATGATTATAGGAGGGTTTTCAATGGGAGGGGCCATGGCTTTGCATTTAGCCTGTCGATACCACGCAGACATAGCTGGCATCTTTGCTTTATCCAGCTTCCTCAACAAGGACTCTGTTGTTTACCAGGTCCTTAAGAAGAATCAGTCGCCGGTTCCAGAGCTGTTCCAGTGCCACGGAAAGCCCGATCAACTGGTGCTTTACCAGTGGGGTGAGGAGACTAACGGTCTGCTGAAGGCCTCAGGGATGAAGACGTCATTTCAAGCATTTCCAAACCTGCAACATGAGCTTAGCAGACCTGAACTTGAGCAGTTAAAGTCCTGGATACTAAATAAACTGCCACCGGGTAATGAGTAGGTTTTTATAAATGATCTCTGCTCTGATAATGGTATTTCTAAACAGGGAACAGTCACACATTTGAAACCACAAAAGACCAAATATATCATCTGATTCCTGGGCCATTGTGATttgtcctttttgtttgtttttctttgacatTGCCAATAGGTTTATATACATTAGGAGTGGAATTTACACACTGCATACCTCCTTTTCTAAATGAAGCAAATAAACAGATTCCTGAACA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K06999 K06999; phospholipase/carboxylesterase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003663 True 1071 mRNA 0.48 5 13387807 13398847

Neighbor

gene id symbol gene type direction distance location
AMCG00003659 adcy3,LOC107688975 coding downstream 70909 13290299 ~ 13316898 (-)
AMCG00003657 NA coding downstream 104293 13281451 ~ 13283514 (-)
AMCG00003658 wdr26,LOC103044372 coding downstream 117562 13251098 ~ 13270245 (-)
AMCG00003661 NA coding downstream 151760 13234073 ~ 13236047 (-)
AMCG00003660 NA coding downstream 154191 13217541 ~ 13233616 (-)
AMCG00003664 tgfb2 coding upstream 110944 13509791 ~ 13514900 (-)
AMCG00003665 NA coding upstream 146504 13545351 ~ 13562197 (-)
AMCG00003677 LOC107733121,LOC107582237 coding upstream 939579 14338426 ~ 14354533 (-)
AMCG00003685 NA coding upstream 988708 14387555 ~ 14394904 (-)
AMCG00003686 cdc42bpa coding upstream 1027438 14426285 ~ 14461583 (-)
G2291 xdh,LOC107752765,LOC107592779,LOC107733164,LOC107674096 non-coding downstream 150814 13233495 ~ 13236993 (-)
G2287 NA non-coding downstream 209635 13172632 ~ 13178172 (-)
G2285 NA non-coding downstream 244279 13131620 ~ 13143528 (-)
G2266 NA non-coding downstream 286489 13100512 ~ 13101318 (-)
G2257 NA non-coding downstream 307786 13077648 ~ 13080021 (-)
G2324 NA non-coding upstream 16014 13414861 ~ 13415156 (-)
G2337 NA non-coding upstream 109045 13507892 ~ 13508930 (-)
G2443 fzd3b,LOC107729283,LOC107734193,LOC107665105,LOC107589599,LOC108270052 non-coding upstream 1010389 14409236 ~ 14410253 (-)
G2444 LOC108270052,LOC108428681 non-coding upstream 1016532 14415379 ~ 14415673 (-)
G2445 NA non-coding upstream 1019731 14418578 ~ 14419732 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 271147 13071796 ~ 13116660 (-)
G2236 NA other downstream 352318 13034953 ~ 13035489 (-)
AMCG00003625 NA other downstream 1309655 12075319 ~ 12078152 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 1448024 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 1598532 11743989 ~ 11789275 (-)
AMCG00003667 NA other upstream 265896 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 610611 14009458 ~ 14013021 (-)
G2500 NA other upstream 1411939 14810786 ~ 14811331 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 2116826 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 3208563 16607410 ~ 16628401 (-)

Expression


Co-expression Network