Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003668 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 13797279 ~ 13797599 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003668 | True | 216 | mRNA | 0.58 | 2 | 13797279 | 13797599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003666 | NA | coding | upstream | 52911 | 13737602 ~ 13744368 (+) |
| AMCG00003656 | NA | coding | upstream | 472057 | 13320203 ~ 13325222 (+) |
| AMCG00003654 | cnih4,LOC106584110 | coding | upstream | 550424 | 13242051 ~ 13246855 (+) |
| AMCG00003653 | NA | coding | upstream | 705185 | 13091093 ~ 13092094 (+) |
| AMCG00003647 | NA | coding | upstream | 742098 | 13053429 ~ 13055181 (+) |
| AMCG00003670 | esrrga,LOC107582200,LOC107733169 | coding | downstream | 211872 | 14009471 ~ 14013046 (+) |
| AMCG00003669 | esrrga,LOC107719475 | coding | downstream | 258852 | 14056451 ~ 14067694 (+) |
| AMCG00003673 | NA | coding | downstream | 294414 | 14092013 ~ 14190098 (+) |
| AMCG00003675 | NA | coding | downstream | 394269 | 14191868 ~ 14204400 (+) |
| AMCG00003676 | NA | coding | downstream | 422533 | 14220132 ~ 14222904 (+) |
| G2336 | tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 | non-coding | upstream | 256125 | 13539972 ~ 13541154 (+) |
| G2334 | NA | non-coding | upstream | 282214 | 13514660 ~ 13515065 (+) |
| G2333 | NA | non-coding | upstream | 284281 | 13512600 ~ 13512998 (+) |
| G2332 | NA | non-coding | upstream | 284748 | 13512194 ~ 13512531 (+) |
| G2331 | NA | non-coding | upstream | 285450 | 13511535 ~ 13511829 (+) |
| G2380 | NA | non-coding | downstream | 281513 | 14079112 ~ 14079327 (+) |
| G2446 | NA | non-coding | downstream | 623132 | 14420731 ~ 14421310 (+) |
| G2517 | NA | non-coding | downstream | 1208747 | 15006346 ~ 15030368 (+) |
| G2563 | NA | non-coding | downstream | 1317030 | 15114629 ~ 15114837 (+) |
| G2564 | NA | non-coding | downstream | 1318106 | 15115705 ~ 15116972 (+) |
| AMCG00003655 | xdh | other | upstream | 590440 | 13155060 ~ 13206839 (+) |
| AMCG00003648 | LOC106571761 | other | upstream | 754682 | 13025569 ~ 13042597 (+) |
| AMCG00003643 | kif25,LOC100703631,LOC102203072 | other | upstream | 880277 | 12902566 ~ 12917002 (+) |
| AMCG00003614 | NA | other | upstream | 2067288 | 11725083 ~ 11729991 (+) |
| G1989 | cnr1,LOC104936193 | other | upstream | 2219950 | 11573731 ~ 11577329 (+) |
| G2440 | NA | other | downstream | 620917 | 14418516 ~ 14419732 (+) |
| AMCG00003690 | NA | other | downstream | 1054153 | 14851752 ~ 14866758 (+) |
| AMCG00003702 | NA | other | downstream | 1503481 | 15301080 ~ 15318228 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | downstream | 2227272 | 16024871 ~ 16039640 (+) |
| AMCG00003744 | NA | other | downstream | 3234971 | 17032570 ~ 17042594 (+) |
