Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003674 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 14329530 ~ 14335669 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060034 | notochord cell differentiation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003674 | True | 714 | mRNA | 0.57 | 4 | 14329530 | 14335669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003672 | NA | coding | upstream | 845 | 14299567 ~ 14328685 (+) |
| AMCG00003671 | NA | coding | upstream | 36767 | 14233934 ~ 14292763 (+) |
| AMCG00003676 | NA | coding | upstream | 106626 | 14220132 ~ 14222904 (+) |
| AMCG00003675 | NA | coding | upstream | 125130 | 14191868 ~ 14204400 (+) |
| AMCG00003673 | NA | coding | upstream | 139432 | 14092013 ~ 14190098 (+) |
| AMCG00003679 | nrbp1,LOC103372645 | coding | downstream | 30647 | 14366316 ~ 14382592 (+) |
| AMCG00003680 | NA | coding | downstream | 49469 | 14385138 ~ 14388550 (+) |
| AMCG00003678 | LOC108270052,LOC107665105,LOC107729283,LOC108428681,LOC107589599 | coding | downstream | 72760 | 14408429 ~ 14416083 (+) |
| AMCG00003683 | NA | coding | downstream | 204875 | 14540544 ~ 14548128 (+) |
| AMCG00003681 | NA | coding | downstream | 220321 | 14555990 ~ 14558193 (+) |
| G2380 | NA | non-coding | upstream | 250203 | 14079112 ~ 14079327 (+) |
| G2336 | tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 | non-coding | upstream | 788376 | 13539972 ~ 13541154 (+) |
| G2334 | NA | non-coding | upstream | 814465 | 13514660 ~ 13515065 (+) |
| G2333 | NA | non-coding | upstream | 816532 | 13512600 ~ 13512998 (+) |
| G2332 | NA | non-coding | upstream | 816999 | 13512194 ~ 13512531 (+) |
| G2446 | NA | non-coding | downstream | 85062 | 14420731 ~ 14421310 (+) |
| G2517 | NA | non-coding | downstream | 670677 | 15006346 ~ 15030368 (+) |
| G2563 | NA | non-coding | downstream | 778960 | 15114629 ~ 15114837 (+) |
| G2564 | NA | non-coding | downstream | 780036 | 15115705 ~ 15116972 (+) |
| G2571 | NA | non-coding | downstream | 792927 | 15128596 ~ 15130200 (+) |
| AMCG00003655 | xdh | other | upstream | 1122691 | 13155060 ~ 13206839 (+) |
| AMCG00003648 | LOC106571761 | other | upstream | 1286933 | 13025569 ~ 13042597 (+) |
| AMCG00003643 | kif25,LOC100703631,LOC102203072 | other | upstream | 1412528 | 12902566 ~ 12917002 (+) |
| AMCG00003614 | NA | other | upstream | 2599539 | 11725083 ~ 11729991 (+) |
| G1989 | cnr1,LOC104936193 | other | upstream | 2752201 | 11573731 ~ 11577329 (+) |
| G2440 | NA | other | downstream | 82847 | 14418516 ~ 14419732 (+) |
| AMCG00003690 | NA | other | downstream | 516083 | 14851752 ~ 14866758 (+) |
| AMCG00003702 | NA | other | downstream | 965411 | 15301080 ~ 15318228 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | downstream | 1689202 | 16024871 ~ 16039640 (+) |
| AMCG00003744 | NA | other | downstream | 2696901 | 17032570 ~ 17042594 (+) |
