AMCG00003683


Basic Information

Item Value
gene id AMCG00003683
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 14540544 ~ 14548128 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003683
ATGCCACACAGCGCAGACGCACCGCGAGACGCAGCGACACGATTTTGCTCTTCAACGAGACTGAGTTTTGCTACAGATCAGCGACAGAGCAGCGACAGCAGGCCTAGCTACACGCGAATTTGCTCCGTCCGTGGAAACATTCGCTGGTTGTACCAAGTGACTCAAGATTCAGTGGATCAGGGTTTAGGAGTCTGCGTGCAGAGAAAGATCCTGGCTTGGTTTGACAAGTGTGACTCTGCTGGGCTCTCTGAGTCCAGCACCCTGCAAGCCAGCAACCCATCTGACTTGGACGCACAGGTGTCTGGGGAGCAGACACAGAGTGGAGGAGGGCCAGAGGAGCCCATTGGGAAGGAGGATTGTTTATCCATAGATGCATTTGAGTGCTCAGAAGTCAGTGCCCTGTGCTCCATGGGGAGTGAGGACACAGAAATCGGTGCCAGTGCCCACTTCTCCTCTGACAGCGCCGAGCAGGAGAGCCCACGCTGTGGCCCTGCAGAACTCCCTGTTGGCTGCCAGGATGAGAACGGGCTCAGCGATGCTGGCACCTCGGTCAGCAGTGTGGAGCCAGTGGTGAATAGCAGTGCTTTCCACCTGGAAGCTGCCTTTGTGGAGGCGAACTCAGTCACAGAGAGTGTGGGCAATGAGCTGCAGTACAAGTGTGCCGGCTGCCTGCAGTATCACCAGAGTCTGGCCTCCCTGCAGGCCCATCTGACACAGGGCTGGAGAGAGGGCTACAGTTGTGGGGTTTTCTACCGCACGCTGCTCTCAACATACCAGAGGAGAGGCCAGCAGTACAGGGAGCCGAGTCCCCAGGGCTCCAGGGCTCCTAGCAGCTCATCGGTCAGCAGTGCGGGGCTGGTTATCAATAATAGTGCTTACATGGACCCTGCATTTGTGAAGGCCATCTCGATCAGAGAGACGGTGGGCAATGTGCCACGGTACAAGTGTGCCGGCTGTCTGCAGTACTACTACAGTATAGCCTCACTGCAGTGGGaactgcctaaaacttttcTGGAGCAAACAGAAAATCACAACACCTCTGTGAGTGGGAACGAAATTGGTACTCTTGAGTTCTTTGCCCCTGAGACAGTGCGGGTTGGACGGTACCGGGCACTTCCTGCCACAGTGTGGTCAGTGGGAGTTCTCCTGTATGTCCTGCTGTGCGGCTCGTACCCTTTCTGTGATGGCCGCGCAATTATACAGGGGAAGCTCTCTTTCCCCAGTGGGCTCTCAAAAGATGCTGTAACATCTCTGCTGCAGTGGATGGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003683 True 1272 mRNA 0.56 5 14540544 14548128

Neighbor

gene id symbol gene type direction distance location
AMCG00003678 LOC108270052,LOC107665105,LOC107729283,LOC108428681,LOC107589599 coding upstream 124461 14408429 ~ 14416083 (+)
AMCG00003680 NA coding upstream 151994 14385138 ~ 14388550 (+)
AMCG00003679 nrbp1,LOC103372645 coding upstream 157952 14366316 ~ 14382592 (+)
AMCG00003674 NA coding upstream 204875 14329530 ~ 14335669 (+)
AMCG00003672 NA coding upstream 211859 14299567 ~ 14328685 (+)
AMCG00003681 NA coding downstream 7862 14555990 ~ 14558193 (+)
AMCG00003682 NA coding downstream 16400 14564528 ~ 14580910 (+)
AMCG00003688 NA coding downstream 59858 14607986 ~ 14617192 (+)
AMCG00003691 NA coding downstream 448769 14996897 ~ 15005277 (+)
AMCG00003696 NA coding downstream 471280 15019408 ~ 15054371 (+)
G2446 NA non-coding upstream 119234 14420731 ~ 14421310 (+)
G2380 NA non-coding upstream 461217 14079112 ~ 14079327 (+)
G2336 tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 non-coding upstream 999390 13539972 ~ 13541154 (+)
G2334 NA non-coding upstream 1025479 13514660 ~ 13515065 (+)
G2333 NA non-coding upstream 1027546 13512600 ~ 13512998 (+)
G2517 NA non-coding downstream 458218 15006346 ~ 15030368 (+)
G2563 NA non-coding downstream 566501 15114629 ~ 15114837 (+)
G2564 NA non-coding downstream 567577 15115705 ~ 15116972 (+)
G2571 NA non-coding downstream 580468 15128596 ~ 15130200 (+)
G2619 NA non-coding downstream 825067 15373195 ~ 15377637 (+)
G2440 NA other upstream 120812 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 1333705 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 1497947 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 1623542 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 2810553 11725083 ~ 11729991 (+)
AMCG00003690 NA other downstream 303624 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 752952 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 1476743 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 2484442 17032570 ~ 17042594 (+)
G3047 NA other downstream 3133689 17681817 ~ 17683988 (+)

Expression


Co-expression Network