AMCG00003696


Basic Information

Item Value
gene id AMCG00003696
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15019408 ~ 15054371 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003696
ATGATCCTCGCCGCCGCGCTGGCGCTCCTCTGCGGCGCCGTGGGGGCGAGCGAGCGGCCGTGGTATGAGGAGCTGTGCAGGTTCAAATGGGAGGCTATAGACACAGACGGGAAGGTGAATTACTCCATAACGCTCTGCGAGGCCTCGCCTGTTAACAGCTGTGGAAAAGACTCTGTCGTCTGTGCCTATGATGTAGCATCCAAGTGGCATTCTGTGGGTGACCGATCTCAGCAGCTGTCTTCTGATTATGTGCTTGGGTTTAACACAAGTCAGAAATGCTCAGAGCCGGGCTCCAAACAGAAGGTTCAGAGCAGCATCAGCTTCCTGTGTGGGAAGACCATGGGAACACCTGAATTTGTGACCGTGTCTGAATGTGTGCACTACTTCGAATGGAGGACATATGTAGCTTGCAAGAAGGACAAATTCAAGCCCCATTCAGAGGTGCCCTGCTATGTGTTTGACACTGATGGGAAAAAGCATGACCTGAACCCTCTGATCAAGACCATGGAGGGTTACTTGGTGGATGACTCGGATGCTGATTCTGACTTATACATCAACATATGCAGGAGCATCAGTAAGTTTGCCTTGCCTAAATCCAGTTCTCAGCTGTCCTGTCCTGAGAACTCGACTGCTTGCCTCAAGATGAACAACAATTACTACAGTGTTGGCCAAGCCACTGAAGCACTACAGCTGGCTGATAAAGACAGACTGGTGCTGCACTATGGCTATTCAGGCCCGAAGCTGGATTTCTGTGGGACTCACACTCCTGCTGTTACCATTACCTTCATTTGTCCATCAAAGAGACAGGAGGGCAGTGACCCCAGACTGACGGCGAAAGCAAACTGCCGCTATGAGGTGGAGTGGGTGACCGAGTACGCCTGTCACAGAGATTACCTGGAGAGCTCAGACTGCAAGTTCACCAGCGATCAGCACGACATCTCCATCGACCTCAGTCCTCTCACCCTTCCCGCCAGTTCAGTAAACCCATACCAGACATCGTCCCACACCAGCGATGGCATAGATGATTACGTGTATTACCTTAACGTGTGTGGAGAAATCAAGAGTGGCGGCTGTGCCGATACCAAGGGCTTCATCTCCTCCTGCCAGGTGAAGGCCGACGGCAGTCTAAAGAAGGTTGCAGGGAGATATCAGAACCAAACTCTAAGGTACTCTGACGGAGATCTCACCCTGATTTACCCTGGGGGGAATACCTGCAGCTCAGGCTTTCAGAGAATGACCATAATCAACTTTGAGTGCAACCAAACAGCTGGTAATGATGGGAGGGGCTCGCCGGTGTTCATTGGCGAGACGGACTGCACGTACTTCTTTGACTGGCAGACTGCGCATGCCTGTGTGAAAGAGAAGGAGGATCTTCTGTGCCGGGTCACAGACGGGAAGAAGCACTACGACCTCTCGTCTTTAACCAGATATTCAGagtcGGGGGCAACTATGAACTGGGAGGCAGTGGACAGCAGTGCGGTGGAGTCGGACAGGAAGCACTTCTACATTAATGTGTGTCACAAGGTCATCCAGGAGGAAGCGACCAGCAGCTGCCCAGAGGACACTGCGCTCTGTGCTGTGGGGAAGGACAACAAACCAAAGAGTCTGGGAAAATTTCTCTCCTCACCCAAAAaagatgacaataataatatcctGTTGACTTACACGGAGGGGGACGAGTGCAATGGCAAAAGCAAGATTAAAAGCATCATCACGCTGGTATGCAAGCCTGGTGAAGGTGACAGCGCCCCTTTGCTGAAGAGCGTGTCCAGCGACGAGTGTGTCTATGAGTTTGAATGGCACACCGCTGCAGCCTGTGTATTGTCCAAGACCAAGGGAGACCACTGCGTGGTGTCGGACCCCCAGGCTGTGTGGAATCTCGGGGAGTTCAACGCTAACCTGTCCTACTATGACGGCATGATCCAGCTCACTTACACGAACGGGACCCCGTACAATAACGAGCAGCACACTCAACGCTCGACACTTATCTCCTTCCTGTGTGATCGGGAGGCTGGAAAGGGCTACCCCCAGTATCAGATTGAAGATGGGACCACTTACAACTTCAAGTGGTACACCTCATACGCCTGCCCAGAAGTGCTGCTGGAGTGTATGGTGACTGACCCAAACACAATGAAACATTTGTCCAGGTCGGTAGGCAGTGAGGAGCCCAACTGGTATGCTATGGATGACTCTGGCAGTCTGAGGAAGTACTACATCAACGTTTGTCGCCCCCTCAACCCTGTGCCGGGGTGTGACCGCTATGCCTCGGTCTGCGAGATAAAGTACGAAGCGCAAGGGGACATGATGGTTGAAAAGGTGTCCATTAGCAACCTGGGCATTGCAAAGAAGGGCCCCGTGATCGAGAAGGAGAACAGTCTGCTCCTGGAGTACAGTGATGGATCGCTGTGCGACTCAGATGGCAGGAAGATGCCCTACACCACCAGAATCCACCTGGACTGCTCCCGGGGTGCCATGTCTTCTGGCCCTCGCTTCATCATCAGTGAGAACTGCACCACCACCTTCCTGTGGGAGACCGAGGCTGCCTGTGCCATCTCGAACTCCGAGAACAAAAATGAGACCTGTACTGTGAAAGACCCGAACACAGGATTCGAGTTCAACCTGAACCCTCTTGCTTCCCAAAATGGTTACACAGCTTCAGGGAATGGGAAGACATTCAAGGTGAATATATGTGGCTCGATACCGGAGTGTGGAGAAAGTCATGGCAAGCCTATGAGAGGCTGTGAGCTGGAGGATGGGCAGCCTGTGGCTCAGGTTGGGGTGGAGAGCTCCTTGCAGTTCTCCACTGACAGCTTGCTGACGCTCACTTACAAAGGGGACCTCGATAAGCCCACAGGAACTCGGGATACCTTTACCATCAGCTTTGCCTGCGACCAGGACACATACCCGGGGGAGCTGCGGCTCCTGCGCGAGGAGATGAGCTCGTCTGCCCACGTGACTCACGATGCGTTCTTCGAGTTCCGCACCGCTCTGGCCTGCGTACCCGCCCCTGTGGACTGCAAGGTCACCGATTTGTCTGGCAACGAGTACAACCTTGGGGACCTCAGTAGAGACGACCAGCCCTGGGAGGCGATTGACACCTCGGCGGACTCGAAGAAGAGGACCTTCTACCTCAATGTCTGTAAGCCCCTGCCTTGGGTACGGGGCTGCCCAGGAGGAGCCCTGGGTGCCTGTGCCAAACTCGCCACTGGAGGCCTGAACCTAGGCTACATACAGAGCAGCCCCCAGGCGTCCCAGGACGGCTCTCTCAGCATCGTCTACCACAACGGGGAGAAGTGTGGCAAAGGCCGTTACTCCACACGCATTATCTTCCAGTGTGACGACAGCCCAGGGTCCCCTGTGTTTGAACGTCAGGACGGCTGCGAGTACGTGTTTGTCTGGAGGACCTCTGAGGCGTGTCCCATTCGCAGAGCTCAAGGTTACAACTGCACAGTAAGGGACCCCCGCAGTGGATATGTGTTTAACCTGAGAAACCTCTCTGGAAGTGATTACGTGGTGAAAACTGAGAAGTACGACTATCACATAGCAGTGTGTAACTCCCTTCAAACTAAAATCTGTACTCGCAAAGACACAGGAAGTGATGTGGTGTCCTCCTGTCAAGTTGACCACTCTCAGGGACATTTTCAGAGGATCTcggGACTGTCCACACAGAACCTCACCTATGAAGACGGGCTCTTAATGATCAATTATACCCGGGGGGAGAAGTGCCATCAGATTTACCAGCGCTCCACCGCCATACTGTTCAGCTGTGACCACAGCAAAAACCCTGGGACCCCCGTCTTCCTCAGGGAGACCATGGACTGCACATACCTGTTTGAGTGGCACACCACCCTCGCCTGCCTTCCCTTCCAGACAACTGGCTGCGCATTCAAGGATGACGACGGAAATTCTTATGACCTTTCACCTCTGTCGCGGCACCGGGACAACTGGATTGTGGTTGGAGATGAGAATGGGGCAACGATGCGCTATTACATTAACGTCTGCAAGTCCCTTGTGCCACAGAGTGGCTCCTGGAAGTGTCCCTCCAGCGCAGCAGCTTGCCTGAAGAACGGAGAACAGTACAGCAGCCTGGGGGAGGCAGAATCTGGGCCGCAGTGGGAGAACAACGTGCTGGTCCTGAGGTACGTCAACGGAGAGTTCTGTCCGGataggaagaggaagaagatgaCCATCATACGCTTCAAATGTGACGAAGACAAAGTGGACTCGAAGCCAACCCTGATCACCGCAATTGAGGACTGCGTCTATACCTTCATGTGGTTCACAGCGGCGGCCTGTCCTCTCAAGAGCATCACACATGGAGACTGCAAAGTCACCAATCCAGTAACAGGGCATCTGTTTGACCTGAACGGACTAAACCAAAACGTCGGGTACATTACATACAGCAGCGGCAGGCAGCCGATTCACCTCAATATCTGTGGAGCCGTTACCAGTGGGGGTTGCACCGAGGGAGCCGGGGATCCCTGTCCCAGCAACTCCGCCCTCAGGCACAAGAGCATCTTCAGCTTTGTGTGCAGGTCCGACAGCAGCCTGCCCAACAGACCTGTGCTGGTGTCTTCGGATGAGGAATCGTGCACCCACTTCTTCTCCTGGCACACGCCGCTCGTCTGTGAGCAAGAGGTGAGCTGCTCGGTTTTGAACGGGAGCTCCAGCATAGACCTGACTCCGCTGATCCACAGAACTGGCTATTACTCTGCCACTGATGAAGACCTGGAAAAAGCCAAATCTCCAGACTTTTTCATTAACATCTGCCAGCCCCTGAACCCTATCCCTGGAGTGAACTGCCCTCCTGGAGCCGCTGTGTGCATGGACCCTGTCGACGGGCCTCCTATAGACATTGGGCGAATCACTGGACCGCCACAGATCAACGAGGCCATCAACGAAGTGTACATTTCCTTCAACAGCAGCACCACGTGTCCCTCTGACCCCTCCAAGAACTACACGTCTCTCATTGTGTTCAGCTGCCAGCGAGGCACAGACATGGGTACACCCCAGATGATCAGGAAGTCCAGCTGCAGCTATGTGTTTGAATGGGCCACGCCACTCGTGTGCCCTGACTCAGTCAGCTTTTCCAACTGCCGTCTCAAGGACGAGCAGCTGCAGTTCACCTTCGATCTGTCCCCTCTGACAGGGCAGAGTTACCAGgtACCGTCCGGCTCCAACACTTTCCTCATCAACGTGTGTGCAGAAGTGAAGGACTCTAAGTGCAAGGGCAGTGCTGTGTGCCTGGTCTCGGGCGATACTGTGTCTTCCTTTGGGATCCCTAAGATGATGTCCATGGACTACAACCGTCAGGACCAGACCATTCTAATGAAATACATCAGTGGAGACTCCTGTCCATCAGTGACTGAAAAAGAGGAAGTATGCGTCTTCCCTTTTCAGTTCCAAAAGAAACCCTATATGAAGTGCACCACAGATGGCAGGGTTGACAACCGAGATTGGTGCGCAACTACGGATGACTACGACAGAGATGGAAAATGGGGATTTTGCGCAAATGTCACAGAAAAGAAGAGCTCCACCTTCATCTTCAAGTGTGATCGGTCAGCCGGCCGAGGCTCCCCCCAGCTGCTCAGCGTAACCCAGGGCTGCTCGACCCTTTTCGAGTGGAAAACCAGCGTGGTGTGCCCTCCCAAGAAAATGGAGTGCAAGGTGGTGAACAATCACATGACCTATGACCTGCGCACCCtgtcctctctcacctctccCTGGAAATTCAGCCACAACGGCGACTCGTACTACATCAATGTTTGCCAAGGTATGTATGGAGGCCTGACGGACTGCCCAGAGAACGCCGCTGTGTGCCGGAGGACATCAAAGGGAAGCACGCAGGCTTTGGGACTAGTCTACACCCAGAAGATCAGTTTTAGGGGCAAGTAG

Function

GO: NA

KEGG:

id description
K06564 IGF2R, CD222; insulin-like growth factor 2 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003696 True 5895 mRNA 0.54 40 15019408 15054371

Neighbor

gene id symbol gene type direction distance location
AMCG00003691 NA coding upstream 14131 14996897 ~ 15005277 (+)
AMCG00003688 NA coding upstream 402216 14607986 ~ 14617192 (+)
AMCG00003682 NA coding upstream 438498 14564528 ~ 14580910 (+)
AMCG00003681 NA coding upstream 461215 14555990 ~ 14558193 (+)
AMCG00003683 NA coding upstream 471280 14540544 ~ 14548128 (+)
AMCG00003695 NA coding downstream 10645 15065016 ~ 15096524 (+)
AMCG00003693 NA coding downstream 50373 15104744 ~ 15121566 (+)
AMCG00003694 NA coding downstream 90251 15144622 ~ 15156393 (+)
AMCG00003703 NA coding downstream 200685 15255056 ~ 15289576 (+)
AMCG00003705 NA coding downstream 279630 15334001 ~ 15334318 (+)
G2446 NA non-coding upstream 598098 14420731 ~ 14421310 (+)
G2380 NA non-coding upstream 940081 14079112 ~ 14079327 (+)
G2336 tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 non-coding upstream 1478254 13539972 ~ 13541154 (+)
G2334 NA non-coding upstream 1504343 13514660 ~ 13515065 (+)
G2333 NA non-coding upstream 1506410 13512600 ~ 13512998 (+)
G2563 NA non-coding downstream 60258 15114629 ~ 15114837 (+)
G2564 NA non-coding downstream 61334 15115705 ~ 15116972 (+)
G2571 NA non-coding downstream 74225 15128596 ~ 15130200 (+)
G2619 NA non-coding downstream 318824 15373195 ~ 15377637 (+)
G2641 NA non-coding downstream 362605 15416976 ~ 15419869 (+)
AMCG00003690 NA other upstream 152650 14851752 ~ 14866758 (+)
G2440 NA other upstream 599676 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 1812569 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 1976811 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 2102406 12902566 ~ 12917002 (+)
AMCG00003702 NA other downstream 246709 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 970500 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 1978199 17032570 ~ 17042594 (+)
G3047 NA other downstream 2627446 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 3077548 18131919 ~ 18142633 (+)

Expression


Co-expression Network