AMCG00003697


Basic Information

Item Value
gene id AMCG00003697
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15161825 ~ 15171332 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003697
TTCACTACATTCTGTTACAGCTTGGATTGCTGTCAGACGGGTTACTCCTCTTTGCCAGAGTGCATTTGCATAGCTTTACACTTGAGGATCAGTCGTCTTAGAAAAGGCAGGAATATGGGACGGCACATAAAAAATATCCTGGTTGTCTCTTTTGgatttttgctgttgtttacaGCCTATGGAGGACTCCAGAGCTTACAGAGCAGCCTGAATGCCAGCGATGGCATGGGAGTGGCATCGCTGAGTGTCATCTACGCAGCCATTATAGTGTCCTCCATGTTCCTGCCACCCATTCTCATCAAGAACTTGGGGTGCAAGTGGACCATCGTGGGGTCGATGGCCTGCTATGTGGCATATTCTTTTGGAAACCTTGCGCCAGGATGGGCGTCTCTGATGACAACCTCTGTGATTCTAGGATTAGGAGGGTCTCCTCTTTGGTCTGCAAAGTGTACATACCTGACCATCAGTGGAAACATGCAGGCTGCAAAGGACGACAAGAGAGGTCAAGATGTGGTCAACCAGTACTTTGGGATCTTCTTTCTAATATTTCAGTCATCTGCCGTGTGGGGAAACCTCATGTCATCGCTTATATTTGGGCAAGACACGGAGATAACTAAAATACCTGAAGAAGATTTACAATTATGTGGGGCTGGGACCTGTGAGTACATGGGATCcaatacaacaaacacaacaagacCTGCTACAGAGTTAGTGAACATACTTCTGGGCAGTTACATAAGTGTCGGCATCTTGGCTATGATTCTTGTGGCTGTTTTTCTGGATAATCTGGATAGAGCAGAGTCCCAGGCCTTTAGGGAAAACAGGGATCCGTTCTGGACAGTCTTCTTGGCTACCTTCAAACAACTCACTGACAAGAGACAGATCCTTATCATCCCCTTGACGATGTACAGTGGCTTTGAGCAGGGCTTCCTCGCAGGAGACTACACAAAATACTATGTGACCTGTGCCTTGGGAATCCACATGGTTGGCTACGTGATGATCTGCTTTGGCGCCACAAACTCCTTATGCTCCTATGCCTTTGGAAAGCTGTCGCAGTACACAGGCAGAGCTGCTTTATTTGGCTTGGCACTTTACGGAATTCTCTTTCATAACCACAAGGAGGCAGCATTCGCCAACTATCGGCTGTGGGAGTCCGTGGGCTTTGTGATCGCCTTTGCCTACAGCAACTTCATATGCCTTGATGTGAAGCTGTATGTCCTGTTATCAGTTCTGATACTGTCTATGGTCCTCTATGCCTGGGTTGAGTATGAAGAGCACAAGAATCCTACTGCGCGGGAAGGCAGTGCGccagagaaggagaaggaacaAGTGGTAGAAAACTGCATTGCTCAAACTCAATTGTAACACTGCATTCATATTTACTACAAGGAGTTGCTTTGACGGATGATTAATTATTGAGGCAAAATCTGATCATAAATTAACATAGAAGCTCCATATGTATAAAGTGTTCTCACTCACTCTCTAATTTTAAGTATTCATGTATATATGACTCAATTGGACTGTCATCAATATTCTGGGGTTTGACAGTAGCCACTAATGCCCAAATACTGAGCAACAGCCAAAATCACGTTCTACCTTTTCTTCAGACGCGCTTCTTTATACAGTTGGAATGGAGgtcaataataatgtatattggTTCCAATACGTTCGTCAGCCTTCAGGCAATGTTATGTACTAACTTTTCCATCCTAACTTTGGGCTTCAACACTTGCAACATGCAATTTTGTGTGTTCGTACGGCACAATAACACTCCATAAGTGTAGCAGTCGAAAACACAAAACCATGTTAACTGCTGAACATTCAATACCACGGTCATGAATGCAACTGTTCTCGTTTATCAGTGGGTGTTCAGCCAGTACCAATAATTGCCTTATTATGGGATTAATTGTGTTTCAAATCAGACagtatattgttattgttgtattaaCCTGTACAATGAATGATTATTTTGCTATTTTGGatgtatatttgtaatgatAGAAGTAAagtttatgtttaaaaata

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003697 True 2025 mRNA 0.43 7 15161825 15171332

Neighbor

gene id symbol gene type direction distance location
AMCG00003699 NA coding downstream 2508 15157494 ~ 15159317 (-)
AMCG00003700 NA coding downstream 18130 15142235 ~ 15143695 (-)
AMCG00003698 plg coding downstream 28041 15121769 ~ 15133784 (-)
AMCG00003692 NA coding downstream 145147 15006417 ~ 15016678 (-)
AMCG00003689 NA coding downstream 517369 14617463 ~ 14644456 (-)
AMCG00003704 NA coding upstream 210124 15381456 ~ 15388921 (-)
AMCG00003707 NA coding upstream 248360 15419692 ~ 15456251 (-)
AMCG00003708 crim1,LOC107582940,LOC107662656,LOC107730553,LOC107679775 coding upstream 307162 15478494 ~ 15487201 (-)
AMCG00003709 crim1,LOC107730553,LOC107679775,LOC107662656,LOC106601300 coding upstream 344340 15515672 ~ 15519593 (-)
AMCG00003710 crim1,LOC107719193,LOC107679775,LOC107602268,LOC107662656,LOC107730201 coding upstream 419290 15590622 ~ 15591023 (-)
G2565 NA non-coding downstream 45642 15115983 ~ 15116183 (-)
G2494 NA non-coding downstream 462588 14698959 ~ 14699237 (-)
G2447 NA non-coding downstream 740510 14420731 ~ 14421315 (-)
G2445 NA non-coding downstream 742093 14418578 ~ 14419732 (-)
G2444 LOC108270052,LOC108428681 non-coding downstream 746152 14415379 ~ 14415673 (-)
G2615 NA non-coding upstream 144064 15315396 ~ 15318210 (-)
G2636 NA non-coding upstream 206865 15378197 ~ 15378555 (-)
G2637 NA non-coding upstream 207426 15378758 ~ 15378981 (-)
G2661 NA non-coding upstream 338541 15509873 ~ 15510081 (-)
G2682 NA non-coding upstream 733155 15904487 ~ 15904821 (-)
G2500 NA other downstream 350494 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 1148804 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 1429786 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 2045165 13071796 ~ 13116660 (-)
G2236 NA other downstream 2126336 13034953 ~ 13035489 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 344341 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 1436078 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 1697000 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 1965916 17137248 ~ 17140382 (-)
G3181 NA other upstream 2771245 17942577 ~ 17944942 (-)

Expression


Co-expression Network