AMCG00003698 (plg)


Basic Information

Item Value
gene id AMCG00003698
gene name plg
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15121769 ~ 15133784 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003698
ATCTTATTCTGCTCTTtgttcattataatttatttaaaataaaaatataattttgcccACTTATTTTATACATAGAATTCTACAGAAATTATTCAGAGAAGCTTACGCAATTCAAGGACTTCGCCAAAAACTGCATATTGACTCTCTGTaggatattaaatattaactacTAACTCTGGTTCTTGGAAagaagatttttcttttttaaaacaatattttaggATTAAGCTTTTTAccttgtataatttattttctacagaataataaaaaacatacattttgttatttttaaatataactattgTTTCCAAACAACTATTGTTACAACCCAAATTACAAGAATAGGACTTTGGCCAAAAGTATGGCCAATCTCTTCATCCAAACTCTAGAATAACAAAACAGGTTGCTCTTTAAGGTCTACTGagtagtattttgtatttatttaaaaatatagcaCTAACCAATGTGTTTCTCTATGAATATGAATTGTCAgattatgtttgtttgctttatcgTATTCTGGAGCTCAACTCTTTCCTGTGATGTCACTCTGAAGAGGTTGCTCTCAACCCTCCCCCTGAAGCAACTCTCTCTCAATGTACACACTATGGTGTGAGGGTTAAATTGGGGGTGAGGGGTGCCATGCTGAGAGTGACATCACATAGACTACCAGAAGCAACTGACTGAGTCTGCTTCAGACATCAACACATTCAAGAGGAAAAATTATGGAACAAATCATTGGAATGTGATCTGAATTCGATGGACCAGGGATTTCTTAAATTTCACAATGTTACAATGACTGCCAGTACTTTAGATGATTATGCTAAAACAGAAGGAGCTTGGATATTCTCTGTCATTAAAAGAAAGTACTCAACCATGACTGCTCTTGAATGTGCAGAGAAATGTGACAGCGAGACAGTGTTTACTTGCAGATCTTTTTTCTATACACTGAAAGACCAAGCGTGCACAACATTACCAGCAACCACTAAAACAGAGACCGTGCTGCGCCGGATGGACACAGTCTTGTACGAGAAGAAAATATACCTGCGTGAATGCAAGACTGGCAATGGAGTAGACTACAGGGGAACACTGTCCAAATCTCAGTCAGGGAAGACGTGCCAAAGATGGACGGCAAGCTTCCCACATAAGCCTAaCATCAACCCAAGTTCACACCCAGATGCTGACCTGGAGTCTAACTTCTGCCGAAACCCTGATGGTGACGTCTTGGGACCTTGGTGCTACACCACTGACCCCAACATAAGATGGGAACACTGCACCATCCAAGACTGTGATGAGGACTGTATGTACTGCAGTGGGGAGGACTATAGGGGGAAAGTGTCCAAAACAGAGACGGGCTTCACATGCCAACGCTGGGATTCACAAACACCTCACACCCACGGATACCAACCCCAGATGCTTCCTGATAAATACCTGCAGGAGAACTACTGCCGCAACCCGGATGGAGAACCCAAGCCTTGGTGCTTCACCACAAACCCAACCAAACGCTGGGAGTTCTGCAATATTCCCCGCTGCAccaGTGAACCTCCTTCAATTGCTCCCGAGCTCACCTGTGCCACTGGTGATGGCATCAATTACAGAGGAACCATCTCTGTGACCGAGTCGGGGAAGACTTGCCAGGCCTGGAGCTCTCAGGTTCCACATAAACATTCCAGGACTCCAGAAAATTACCCCTGCAAAAGCATGGAACAGAACTACTGTCGGAACCCGGACAACGAACGGATGCCCTGGTGCTACACCACTGACATCGCAACACGGTGGGAATACTGCAAGGTGCCAACCTGTGGGGACCAGCCCAGCATATATGAACCAGTCAACCCTACTGTGGCGGATTGTTATGAGGACAATGGGACCAGTTACCGGGGCATCACGTCAGAGACTATCAGTGGAAAGAAGTGCCAAGCCTGGAGTGCCATGTCGCCTCACACTCACCAGAAGACGCCACAGGCATATCCAGCTGCTGACCTACGAAGAAACTACTGCAGGAACCCGGATGGTGACCGTGCCCCCTGGTGCTACACCATAGACCCCTCAGTGCGCTGGGAGTACTGCCGGGTGGAGAAATGCATAGTGCCAGTAAATCCACCAGTCGTGTCCGCCGCTGGTCCTACCGTTGTCGTACCCGTGCCCGAAGTCCCTCCTACTGTGGACACCGCCAAAGACTGCAGAATCGGCATCGGGACAGACTACCGAGGTCCGACCTCCATCACAGCCCTGGGCGTGACCTGCCAGGCATGGACCTCCAACACCCCCCACGCACACGCCAGCTTCACTCCCCAAACCCATCCGGACAAGGGGCTGGAGTCCAATAACTGCAGAAACCCTGATGGGGATGTGAACGGGCCCTGGTGCTACACCACAGATCCACAGAAAAAATGGGACTATTGTCAAATTCCATCCTGTGATACCATGCAATGCGGAAAACCAGTGATAAAGCCCAAGAGATGTTTTGGCAGAATTGTTGGTGGCTGTACGTCCAAACCTTACTCTTGGCCTTGGCAGATTAGTCTTCGGACGAGTCCtgctattttaaatgacaagGTGCTGCCCGTTTGCTTGCCAGAGAAAGATTACATCGTGCCAAGTGAGACAGAGTGCTACGTAACAGGCTGGGGAGAGACACAAGGTACTGGCGGAGAGGGGGTGCTTAAAGAAACTGGCTTCCCGATCATAGACAATAAAGTATGCAACCGTCCTTCATATCTGGCTGGAAGGGTGCAGGAACATGAGCTGTGCGCAGGAAATATAGAGGGAGGAACTGACAGTTGCCAGGGTGACAGTGGGGGTCCGCTGGTCTGCTACTCAAAAGAAAGCTTTGTTCTCCAGGGAGTCACATCTTGGGGCCTGGGTTGTGCACACGCCATGAAACCGGGAGTCTATGCAAGAGTCTCGAAGTTTGTGGACTGGATCGAGGATACTATCAAAAAGAATCCTTGATTCAATAAAGTTAGTCCTGAAAAATGCAAAGCGAAAATAGTCTGAgctaaaataatacacaatttgTTTAGGGTACTAATAAGTGACATTGTCCATGTTGAAATCCTGCACCGtgaagttattaaaaaataaagacaaaatcttGGTAAAAGAACCAGATACCCTAACTGGAAGTACTGTACTGGGATTGTCAATAAataaggaaatcaaaataaaagattatggatatgtttttatatatatatatatatatatacttcaaatatatataagttCCAATTCACATGAATTTGGACATTTAACATGGATTTAATTACTAGTAGTACATTTACAGTTGAAGCAAGTACAACTACAAACATtatcaaacagaaataaataagttgtgtgtcagtgttggcACGCAGAGAGTCATgtaatacatttacacttgATTGTTATATAGTACAATCACTGCTGATAGAAGTTGAAGGGAGATCTGTTGAATGTAATGCATATTGCTGAAAGAATTGAACAATGTCTGTTACttgatttaaatggaaattgaaCAGTGTAGGTATGTCATTTTTACCTCAGGTAAGTCACCTAAGAACAGTAGCAGTCCTCGTGCAGCATATCTGGGGTTAACTGACAAAAGTGAAAAGGTGGGCGAGAAAGATTGTCCAGGCATTACTGTAAATTAATATGTTAGTTTTAACAGCTGACTGGTCAAGTTTCTGTTTACAGTTTAGTGTTTTAAGGCCACATACATTGTTAATTGGGGCTATATTCTATCCTAGCTGTCTTTCACATTATCGACCGAGTTTTGTCTTAGTTAATTCAGATTTACACATtgttgaagaaaataattggCCTCTCCAAGACAGGGGGTGGAGACTATTGTCTACACAATATGTCACCAAATAAAAAAGTTACAATTCCACAGAGAGAAACCCATcaaacaaagcaataaaaataaaaaaaatagatgggCACTGTTGCAGTCCAAGATGGGGTAGCAGTGCAGTTGACATCCAATAATCTCTTCTAGATCATCACATGAAGCAAAgcaatattgtatattttgagaTCTTTGGATAACTGGGGGTTTCTGTACATCTGTCCACATCTTGGATGTATTTcaatacagtgttttttcccctgtcACCACCAAAA

Function

symbol description
plg Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within several processes, including blood coagulation; fibrinolysis; and tissue remodeling. Predicted to be located in extracellular region. Is expressed in liver. Human ortholog(s) of this gene implicated in COVID-19; conjunctivitis; myocardial infarction; plasminogen deficiency type I; and thrombophilia. Orthologous to several human genes including PLG (plasminogen).

NR:

description
PREDICTED: plasminogen

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K01315 PLG; plasminogen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003698 True 4107 mRNA 0.43 18 15121769 15133784

Neighbor

gene id symbol gene type direction distance location
AMCG00003692 NA coding downstream 105091 15006417 ~ 15016678 (-)
AMCG00003689 NA coding downstream 477313 14617463 ~ 14644456 (-)
AMCG00003687 NA coding downstream 590089 14528641 ~ 14531680 (-)
AMCG00003684 cdc42bpa coding downstream 638390 14476924 ~ 14483379 (-)
AMCG00003686 cdc42bpa coding downstream 660186 14426285 ~ 14461583 (-)
AMCG00003700 NA coding upstream 8451 15142235 ~ 15143695 (-)
AMCG00003699 NA coding upstream 23710 15157494 ~ 15159317 (-)
AMCG00003697 NA coding upstream 28041 15161825 ~ 15171332 (-)
AMCG00003704 NA coding upstream 247672 15381456 ~ 15388921 (-)
AMCG00003707 NA coding upstream 285908 15419692 ~ 15456251 (-)
G2565 NA non-coding downstream 5586 15115983 ~ 15116183 (-)
G2494 NA non-coding downstream 422532 14698959 ~ 14699237 (-)
G2447 NA non-coding downstream 700454 14420731 ~ 14421315 (-)
G2445 NA non-coding downstream 702037 14418578 ~ 14419732 (-)
G2444 LOC108270052,LOC108428681 non-coding downstream 706096 14415379 ~ 14415673 (-)
G2615 NA non-coding upstream 181612 15315396 ~ 15318210 (-)
G2636 NA non-coding upstream 244413 15378197 ~ 15378555 (-)
G2637 NA non-coding upstream 244974 15378758 ~ 15378981 (-)
G2661 NA non-coding upstream 376089 15509873 ~ 15510081 (-)
G2682 NA non-coding upstream 770703 15904487 ~ 15904821 (-)
G2500 NA other downstream 310438 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 1108748 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 1389730 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 2005109 13071796 ~ 13116660 (-)
G2236 NA other downstream 2086280 13034953 ~ 13035489 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 381889 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 1473626 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 1734548 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 2003464 17137248 ~ 17140382 (-)
G3181 NA other upstream 2808793 17942577 ~ 17944942 (-)

Expression


Co-expression Network