AMCG00003699


Basic Information

Item Value
gene id AMCG00003699
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15157494 ~ 15159317 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003699
ATGGCATTAGCGGCTCCTGGTGCCACGCCCCTGGTGTTCCGGCTTCAGGAAGGTACCCCTGAGGTAGTCCGGGAGGTGCTGCTTGAGCGGGGATGGGTGGAGTACAAcaagcaggagcaggaggaaggAGACTGGAATCTATACTGGCGCACCTCGGCCTTCCGGCACGCAGAGTATGAAAACATCTTGCCCTGGCAAAGGCTGAACCACCATCCCAAAACATCTGGCCTGACACGGAAAGACAGCCTGGCAAGGAACTTGAAAAGGATGAGGGGGACTTTCGGCTCAGCCCTTTATGATTTCAGTCCCACTGCTTTCATCCTCCCCAACGATTACACCCGGTTCTTGGCTGAGTACACCAAGGACCAGCCCGAGAATGGAGGGACACCTGGGTATTGGATCTGCAAGCCGGTTGATCTCTCCCGGGGAAGgggtatatttgttttcaaggcCATTAAGGATCTGACCTATGACTCACCTGTCATCGTACAGCGGTACATCAGCAACCCTCTGCTGGTTTCAGGGTACAAGTTTGACCTTCGCATCTACGTCTGTGTGCGGAGCTTCCACCCTCTCACCGTGTACATGTACCAAGAGGGCCTGGTGCGATTTGCCACGGAAAAGTACAAGCTGACCTCCCTGGACAACCCATTTGCCCATTTAACCAACACGAGCATCAACAAGTTTGGACCCTCTTACACCACTGACAAAGAGCGGGTGGGCCCAGGATGCAAATGGACCATGAGTAAATTCCGCTGTTTTCTCCACAGCCAGGATATCGACGAGCTCCTTCTGTGGCAGAGAATCACCAGTATAGTCACACTCACCTTGCTCACTGTAGCCCCATCTGTTCCACCGAGCCCCAACTGCATGGAGCTCTTTGGGTTCGACGTCCTCATTGACAACAACTATAAACCGTGGCTGCTGGAGGTGAACTGTAGTCCGGCGCTCTCTCTGGACTGTCCGGCCGATGTCACTGTGAAGAAGGGCCTTCTTCACGACCTGTTTGATTTGCTGAACTACAAAAAGATCGATAGCCTGAGACAAAGCGGTTACTTGAGGCAACGCTATAGAGGCTTCTTAGGTCCGGAGTCTTTGGAATCCACCATTCCGCCGGTGCTCCTTCTGCCCAAGTCCATGTGTCAACCCATCTCACAGCACCAGAGCTTCAGTCAGGGAAACCTGCAGAGCTACAGTTCTGCCAGTGAGGATTGTTCACATGCAAAAGAACACTCGCGGTCCATTGCAGTCCAACTCAGCACTGCAGCTCGGAGGAGCCGGAGCGATTCGGCGCGTTGCTCCAAATACATCCCAAATTCCAAGGCATCTATCAGCTGCGAAAGCAACAGCAAATATCCTCCACTTTCCAAAATACCAAAGGGCATTCAGTTGGCAGCCAGCCAGGCAACACTAGAATCTGGATCTCAGTTGTCACTTAAACAAAAGAAACTTCCACTGAAGCAGTCATCCTTGGGTCTTGGTAAGCTACCTCCCATTCACATTCAGAGGTACAAACCTCCTTCGTTTCCGTGGGAGCAAACACCTCAGAACAGCCCGAGACCTCCCTCCCGCGTAGGGGACTTCATCCTCACCTTTCCGTTCAACGATGTTACCTTCAAGGCCTCACAGAGCAAAGTCAACGTGAGAGTCGCTGTCCATGAGGTTCACAGACTCATACATAGGCTGGCGTCCTCTGATAATCAGAAAGGGAAGGCGAGGAGAGAGGCTCGTGTGGAAGTCTGCGATGGGAAGGAATGCTTCGGATCATTGCTTTGGGGTCCGAGGTACCCTCCCTTGCTCAGCGAGTGCTGCTCCCCACCCTGA

Function

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process

KEGG:

id description
K16600 TTLL2; tubulin polyglutamylase TTLL2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003699 True 1824 mRNA 0.53 1 15157494 15159317

Neighbor

gene id symbol gene type direction distance location
AMCG00003700 NA coding downstream 13799 15142235 ~ 15143695 (-)
AMCG00003698 plg coding downstream 23710 15121769 ~ 15133784 (-)
AMCG00003692 NA coding downstream 140816 15006417 ~ 15016678 (-)
AMCG00003689 NA coding downstream 513038 14617463 ~ 14644456 (-)
AMCG00003687 NA coding downstream 625814 14528641 ~ 14531680 (-)
AMCG00003697 NA coding upstream 2508 15161825 ~ 15171332 (-)
AMCG00003704 NA coding upstream 222139 15381456 ~ 15388921 (-)
AMCG00003707 NA coding upstream 260375 15419692 ~ 15456251 (-)
AMCG00003708 crim1,LOC107582940,LOC107662656,LOC107730553,LOC107679775 coding upstream 319177 15478494 ~ 15487201 (-)
AMCG00003709 crim1,LOC107730553,LOC107679775,LOC107662656,LOC106601300 coding upstream 356355 15515672 ~ 15519593 (-)
G2565 NA non-coding downstream 41311 15115983 ~ 15116183 (-)
G2494 NA non-coding downstream 458257 14698959 ~ 14699237 (-)
G2447 NA non-coding downstream 736179 14420731 ~ 14421315 (-)
G2445 NA non-coding downstream 737762 14418578 ~ 14419732 (-)
G2444 LOC108270052,LOC108428681 non-coding downstream 741821 14415379 ~ 14415673 (-)
G2615 NA non-coding upstream 156079 15315396 ~ 15318210 (-)
G2636 NA non-coding upstream 218880 15378197 ~ 15378555 (-)
G2637 NA non-coding upstream 219441 15378758 ~ 15378981 (-)
G2661 NA non-coding upstream 350556 15509873 ~ 15510081 (-)
G2682 NA non-coding upstream 745170 15904487 ~ 15904821 (-)
G2500 NA other downstream 346163 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 1144473 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 1425455 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 2040834 13071796 ~ 13116660 (-)
G2236 NA other downstream 2122005 13034953 ~ 13035489 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 356356 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 1448093 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 1709015 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 1977931 17137248 ~ 17140382 (-)
G3181 NA other upstream 2783260 17942577 ~ 17944942 (-)

Expression


Co-expression Network