AMCG00003700


Basic Information

Item Value
gene id AMCG00003700
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15142235 ~ 15143695 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003700
ATGGCAGAAAATGAGACAAACTGCACAACTGGCAGCCAAGGACTGTATGTTTTCTACTCGGCTGTGATGATCCTGGAGTTCCTCGTGGCTCTTCCTCTGAACGCCTCGGTGCTATATATCTTTCTCTTCAAGTTCAAATTCTGGAAGACCAACACTGTCTTCCTCTTCAACCTCGTCCTGGCAGATATCCTGCTGCTGATCATCTTGCCCGTGATAGCCTACCTCTTCCAACAAGGAATGCGTCGCAGTGACAACATTACTGTCTGCAAGGCGACTCTCTTCCTGCTCTTCCTGAACCGCGGGGCCAGCATCGCCTTCCTCACCGTCATCTCCATCGACCGCTATCTCCGTGTGGTCCACTCCCGCAAGCAGACCTTTCGGAAGGTCCTGAAACGCAAAACCCACATATCCATTTTCATCTGGGTCTTACTGCTGCCCCTGACGGTGCCCACCATGCTGAGGACGTCTGACTGCTGCAACAGCCACAACCGCGACTTGGAATTTGTGACGGGCATCCTGCGTGAGATCGTGTTCTTCACCCAGATTCTTGTGCCTTTCTTGATTTTACTCTTCTGCGCCCTGGGCATCATCCGGAAGCTGAGTGAGAGGACCATAGGGAAGAAAGACAAGATTCGCAGGGCAGTGTTTTTGGTCAGTTTGGTGGTGATCGTGTTCGGGGTCTGCTTTCTGCCTTGCGCCGTCTCCAGAATGGTTCTGTTGATTTTCCGAAGTCAGGGCTGGGAAGATGCAGAAGACACTGCCGTGCAGCATGCggtcatttaa

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003700 True 783 mRNA 0.52 2 15142235 15143695

Neighbor

gene id symbol gene type direction distance location
AMCG00003698 plg coding downstream 8451 15121769 ~ 15133784 (-)
AMCG00003692 NA coding downstream 125557 15006417 ~ 15016678 (-)
AMCG00003689 NA coding downstream 497779 14617463 ~ 14644456 (-)
AMCG00003687 NA coding downstream 610555 14528641 ~ 14531680 (-)
AMCG00003684 cdc42bpa coding downstream 658856 14476924 ~ 14483379 (-)
AMCG00003699 NA coding upstream 13799 15157494 ~ 15159317 (-)
AMCG00003697 NA coding upstream 18130 15161825 ~ 15171332 (-)
AMCG00003704 NA coding upstream 237761 15381456 ~ 15388921 (-)
AMCG00003707 NA coding upstream 275997 15419692 ~ 15456251 (-)
AMCG00003708 crim1,LOC107582940,LOC107662656,LOC107730553,LOC107679775 coding upstream 334799 15478494 ~ 15487201 (-)
G2565 NA non-coding downstream 26052 15115983 ~ 15116183 (-)
G2494 NA non-coding downstream 442998 14698959 ~ 14699237 (-)
G2447 NA non-coding downstream 720920 14420731 ~ 14421315 (-)
G2445 NA non-coding downstream 722503 14418578 ~ 14419732 (-)
G2444 LOC108270052,LOC108428681 non-coding downstream 726562 14415379 ~ 14415673 (-)
G2615 NA non-coding upstream 171701 15315396 ~ 15318210 (-)
G2636 NA non-coding upstream 234502 15378197 ~ 15378555 (-)
G2637 NA non-coding upstream 235063 15378758 ~ 15378981 (-)
G2661 NA non-coding upstream 366178 15509873 ~ 15510081 (-)
G2682 NA non-coding upstream 760792 15904487 ~ 15904821 (-)
G2500 NA other downstream 330904 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 1129214 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 1410196 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 2025575 13071796 ~ 13116660 (-)
G2236 NA other downstream 2106746 13034953 ~ 13035489 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 371978 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 1463715 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 1724637 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 1993553 17137248 ~ 17140382 (-)
G3181 NA other upstream 2798882 17942577 ~ 17944942 (-)

Expression


Co-expression Network