AMCG00003718


Basic Information

Item Value
gene id AMCG00003718
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16207847 ~ 16210277 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003718
CTCCTGCCTCTACCAGTGCCACCCAGAGAGCCATGAAGACCCCACTATGGACCCTGCTGTTGCTGGGTCTGCTCGTCCCCATCCGCAGTGACTGTCAGAGAGACTGTCTGTCCTGCAGCCAGCgtctctttcagcaggatacaTTCAACACCCTGATATGCATCTTGGAGTGTGAGGGCAAGGTCCCCACAGCGGCTACCTGGGAGATCTGCCACAAAGCCGCGGGGAAGTCCTCCTATCCTGTAGGGGGCGGTGCACTGAAGAGAGGGGTGGAAGTGGCCCAGCTGCCCTTGGACCTGGAGGACGGGGGCCTACTCTACACGGGGGCCCTGAAGCGCTTCACCGACGTCACCCAGGCTTTCGATGTCGACAAATTGGAAGGCGAGAAGCGGGTCTCCAAAATCCGAGAGGCCTACCGCACCGAGGGGGAGTCCGAGGAGGGCCCGCTGGAGCCAGAGAGCTTGCCGGGGGACGAGTACGCCGTGCCTGCCCCTGAGGGCTCCATCGACCTCAGCAAGCGCTTCGGCGGTTTCTTGAAAGGGAAGTACGGCTACAGGAAGCTGATGGAGCCGGGCAGGTCCTTGCAGAAGCGCTACGGCGGCTTCATAGGCGTCCGGAAATCTGCCCGAAAGTGGAACAACCAGAAGAGGTTCAGCGAGTTTCTGAAGCAGTACCTGGGCATGTCCACGCGCTCCAGCGAGTACAACAGCCTCTCGGCCGACATCACCGAGCAGAACGAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003718 True 743 mRNA 0.61 2 16207847 16210277

Neighbor

gene id symbol gene type direction distance location
AMCG00003715 elp3,LOC107696156,LOC107698368,LOC107599080 coding upstream 46765 16136846 ~ 16161082 (+)
AMCG00003713 NA coding upstream 128532 16071552 ~ 16079315 (+)
AMCG00003711 NA coding upstream 455986 15726442 ~ 15751861 (+)
AMCG00003706 NA coding upstream 809441 15394813 ~ 15398406 (+)
AMCG00003701 LOC106607895,LOC106571478 coding upstream 836981 15353478 ~ 15370866 (+)
AMCG00003720 mcm3 coding downstream 48177 16258454 ~ 16265698 (+)
AMCG00003719 NA coding downstream 77385 16287662 ~ 16288702 (+)
AMCG00003727 NA coding downstream 205173 16415450 ~ 16427708 (+)
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding downstream 307829 16518106 ~ 16522586 (+)
AMCG00003729 NA coding downstream 336795 16547072 ~ 16569703 (+)
G2721 NA non-coding upstream 121855 16085140 ~ 16085992 (+)
G2719 NA non-coding upstream 122981 16081182 ~ 16084866 (+)
G2698 NA non-coding upstream 174912 16032708 ~ 16032935 (+)
G2681 NA non-coding upstream 303027 15904483 ~ 15904820 (+)
G2641 NA non-coding upstream 787978 15416976 ~ 15419869 (+)
G2755 NA non-coding downstream 19658 16229935 ~ 16231498 (+)
G2797 NA non-coding downstream 218757 16429034 ~ 16430555 (+)
G2833 NA non-coding downstream 382987 16593264 ~ 16597369 (+)
G2836 NA non-coding downstream 388781 16599058 ~ 16599329 (+)
G2861 NA non-coding downstream 658022 16868299 ~ 16934020 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 168207 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 889619 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1341089 14851752 ~ 14866758 (+)
G2440 NA other upstream 1788115 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3001008 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 822293 17032570 ~ 17042594 (+)
G3047 NA other downstream 1471540 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1921642 18131919 ~ 18142633 (+)
G3108 NA other downstream 1936383 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 3061688 19271965 ~ 19397686 (+)

Expression


Co-expression Network