AMCG00003729


Basic Information

Item Value
gene id AMCG00003729
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16547072 ~ 16569703 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003729
CTCGTAGTAGGTGGCGAATTGGGAAGAGTCGACACAAATCCGGGGGATAGCtcgtgttatttatttattagtcgcctaaattgtttttagtttagtcGTTTCCCCCCCTAAACACAAAGGATACCGAAGCTGCTGTTGGAGAGCGGATTATGACAGGGGAGGACTCGCAACAAGAGACACATTGagccctgttttttttctttacgaCAGTCTGCACAGAGTAAGCATGCGTGACCTTGCCGCCCAGGTAACCAGCAGTTTGCTACGCTTTCCAGAGGTAACCGTAGACGCACTTGGGGAAGATGAAATTAAACTGGACTCTGTGCTGCTCGGGAAGTTTGCTACAGGCAGGAACGGACTGGCATGGCTGGCCTGTGGGCCTCAGCTGGAGGTGGTGAGCAGCACCACGGGGGAGAGGCTCTCCGCCTATCACTTCAGTGGCGTGGGAGAGAACCCCCCCAACGTCCTGGCGGCCCGGGAGTTCTCCTGGCTGAAGAGGAGCGGCCTGCTGGTGGGGCTTGAGGAGGCGGAGGGCAGCATGCTGTGCCTGTACGACCTGGGCATCTCCAGGGTGGTGAAGGCTGTAGTCGTACCAGGAAGGatAACTGCGATCGAGCCGTTGATCAGTTATGGAGGAGCGAGCGCCAGCACCCAGCACTTGCACCAGAGCCTGCGCTGGTTCTTTGGCATCGCTGCAGTGGTGACAGACGTGGGTCACGTCCTGCTGATTGATCTGTGTTTGGATGACTTATCGTGCAGTCAGAGTGAGCTAGAAGCCTCAGATCTTCAGGTGATCAACAACTCTCCGACAGAGATCCCTCGTCTCCGGGAGAGCGTGACCAGCCAGGGGCGGCACCTGTGTCTGCAGATCCATTTCCCCAGAGGAACCAGCGCCACGGCTCTTCAGTTCATCCCCAGGACCAACCAGCTGGCGGTGGGCTTCTCCGACGGGTACCTGCAGCTTTGGAACATGAAGACACTGAAAAAAGAGTACCACTCACAGTTGGAGGGAGGCCGGGTGCCCGTCTATGCCTTTACCTTCCAGGAGCCAGAGAACGACCCCCGCAACTGCTGCTACCTCTGGGCCGTGCAGTCCTCACAGGACAGCGAGGGAGACGTGGTCAGTCTGCACCTGCTGCAGTTGGCGTTCGGGGAGAGGAAGTGTTTGGCGTCTGGGAAGATCCTATATGAGGGTCTGGAGTACTGCGAGGAGCGCTACAGTCAGGACCTGAATGGGGAAGCATTCGCGCTGCGGACCCAGGCCACCAGCACGCGGCTGCTGGGCTGCCAGACCATCGAGAAGTTCAGGAATCACCCGGACAGAGACGACAGCATGAACGAAGTTGCCTCCCCTGATACCAGCGTGTCCATTTTCAGTTGGCAAGTGAAGTCATACGGGCAGGGAAAGCCTTCAACCTACGTGGGCGTCTTTGATATTAACCGATGGTACCACGCACAGATGCCAGACTCCTTAAGAATGGGTGAGTTTCTGCACAGCTGCTCCTACTTCGCCCTGTGGTCGCTGGACTCTGTGGTGGCGATGACCTCCCCCTGTCCGCTGCTGGACGTCTTGGTCCACGAGCGCAGTTTGAGTAGGGGGCTGCCGCCCACCTGTCCGCCTCCAGAGCAGTTCTTTAACCCCACCACCTACAACTTCGATGCAACCTGCCTGCTGAACTCAGGCATTGTTCACTTGACATGTTCTGGCTACCAGAAAGAgACATTGAGCTTCTTAAAGAAGTCCGGTCCCTCCTTAAGTGAGGTGATTCCTGATGGCTACAACCGCTGTCTGATGTCGGGGCTACTGTCGTCTCGGCTCACAGACGTCCAGCCTTCCAGCCTCACGCAGGAGGAGCAGCTGGAGGCCATATTGTCCACTGCTGTAGAAACAAGTACATTAGGGCTCATTACGGGATGCATCCGGCAGTGGACTTCAGAAGAGCAACCTCGATCTGCAGCAAACCTGCGCTTCATACTGGAGTGGGCCTGGAGCAAAGTGGTCCTCACTAAAGAGGAGCTCGACAGAATCTGTGCCCCACTCTTTGACAGTTCCTGTAACTTCATTGATCCACAGACACTTCAGCTCCTGCAACACTGCCAGCTGCTCCTTAGCAACCTCAGCACCATCTTAAACTGCTTTCTCAGTGAGGCACAAGAGCTCACAGAAAAGGGGCTGGTGGGCTTGGTAAATAAGAATGTGGTGTCCAGCCTGATCTCACAGTATGCGCGGGTGGTGCTGTGGTTTTGTCGCTCTGGTCTTTTGCCTGAAGGTTCAGaTGAAAATGTTCTTCAGATATCAAGGCCGTTTTACAACTACCCCATCATCCAGAACTATTACACAAGTCGCCGGGAGAAACTGGAGCGCCTCTCGAGAGGTAAATGGTGCGCTGACTGCCTGTTGATTGACGGGCTGGTGTCTCAGTGTGGAGATCGGATTGCAAATCTGTGGAAGAGGGACGAAGGGGGGACAGGACAATACCCACCCCCGACTTTACATgcTTTACTTGACATTTTTCTCCTGGACACTGTTGAAGAAACCTCGAAGCATGCCATTGTAATCTATTTGCTCTTGGACGTCATGTATTCTTTTCCCAACAAAAGCGAGTCGTCCGTGGAGTCCTTCCCCACCGCCTTTGCCATCCCGGTGGGCTTGGTGAAGCTCGTGCAGGGTTTCTGGCTGCTGGATCACAATGACCACGAGAACTCCCTGGACCTTCTCCTGCACCCGGCCACCAGCCGTGCCATGCTGAGTTGGCAGCACGCCCGCGTCATCCAGGCCCTGATGTGCCAGGGGGAGCACCGGCGCGCCCTCCGCTACATCCAGATGATGAAGCCAGCCACGTCGTCCAGCAGCGAGATCAAGCTCTACCTCACAGTGCTGCTCCACAACAGGTGCATGGTGGAAGCCTGGGCCTTGCTGCGGCAGCACTCGAACAAGCTGAATGTGGAGGAGCTGCTGCGCTGCATGTACGAGATGTGCCAGAGCATGGGCCTAATGGAGGAGCTGCTGAAGCTGCCCCTCGCGCTGCCTGAGCAGGAATGTCTGGAGAAGTTCCTGCAGAGCAGCGCTGGCCTTCAAAACCAGGAGTTTCTGATGGTGCACTATCTACAGCAGGCCAACTACGTGCCTGCATTGCAGCTCAATCAGGCCCTGAAGATGAACTTGGTTAATGACCGCGATCCCAAAATCAAGGAGAGAACAAATGCCAGAAACTCGATACTTGACCAGTATGGGAAAGTTCTCCCTAGAGTCCAGCGAAGACTGGCCACAGAGCGGGCAAAACCATACCAGCTCCCGTCCACGATTCTGCGGGAAGTGGCCAGGCCCCAGCCCCTGTCCACCGTGGCAAAACCAGCGCCTGCAGGCAACGTGCTCACCAGAGCAAGCTTCATCAACAACGTGCTTTCCAAAATCGGTGAGGTGTGGTTGGGGAAAACAGTCACGCCCGAGCCTTCTCCTCTGAAAAGCCTAAGAGTTCCTGAATTGCCTTCTTTTACCCCCCGTCGGCAGTCCGTGGAGCTTCCCGATGCCTTTGTGGGAACACCTATTACTAGGACCTCAAAGACCATCTCCAGAATTCTCGATTTAGTTGTCCGCCCAACCACAGAGAAGATGCCCGAGGCATTCAGCTTCCAGCAGACCCCCCCGAAGCAGGGCCGCTCGTGGCCTGCATCCAGCCCCCTTCAGACCTCTGCCGTTAAGGCCAGCGGCCTCAAAAACATCTCCAAGGCTTCAGAGTTGTGCCTGCTGCAGACGCCGCAAGTAGTGAAGAGAGCGCGGGCCCTGACCTCCACCGGCCCCAGCTTCCCGGGCTTCACTCCGCAGTCCATCCTGAGGACGAGCCAGCGGCCGACACCTGTAGGctccccctctgcctctcctGGCCACTCCCTAACCCCGCCGCTGCGAGTGAAGGAGAGCCGCATCACCTTCATAGAGGAGCGCACCCCGAAGACCAGCAGGTGGAGCAACGGGATTGCTGCAGACAGAGAAATTAACTTCCTGTCGACGGCATCGCCCACACTGAAGTCCCAACCTCCCGGCTCCTGGGCGGTCCCTGCTGCGGTGgaggacgaggaagaggagaaagaaaTGGTAGAAGAAGGAGGTATGGCCATGGAGGGAAGCCGACCTCACGAAACCAGCCAAGCATCCGCCCGGTCGGCAGACTCCACACTGGAGTTCCATGATGCCCCCACCCCCGAGGAGCTGGAGGAAGAGGTGGTGACGTTGAATCCGAAGCTGGCGGCTCTCGAGCACCCCAGCTCAGCAGTGGTGAAGGCTAGTGAAAGAGTGACGCCCACAGAGATGCAGGAGGAGGTGCtcacagaggaagaggaagaagagcaGCCCATGGAGCAGACAGGTTCGGACATTGTGGAACAGAACACATTCTCTCTGGACATTCTCTCCACGTTGACACGGTCCGGCATTCGAGAAACCTCTGGCGCAGAATTCAGTTTGACTTCATTCACTACAAGTGAAACAGTCTCTCAGGTGACTGAGGAGCCCCTTTGCCCCGCTCTCGCTGAGAGACCTGCGCTAGAGACTCAGACATCGGAGGCTTCTGAACCGGACGCAGTTGACAGCCATTCTGTGGTGAGCGTCGACGACAGCGAAGACTCCTCCAGCACGGAGTCCGAGACCAAACTGGAAGCGTCGGCGGAGCTGGACCCGGACAGCGAAGTGGAGATCCTGGAGGAGGTGTGTGGGAACCCAAGAGAGCAGCGGCCATCCCCGCCCCATCTCTTCCTGGAGGAGCAGCCCATTCCAGAGCTGGAGTACATGGAGGAGCACCCTGCTGCTGTGCTCCCTGTCCTCGCCCACGAGgctgtggaggaggaggaggatttGGAAGTGGAAGCCCTTGAGGAGGAGCCGGTGTCATTCACAGAGCTGCAGCCCTCCGCCCCCCTCCTCATCCCAGTGGAGTTCAGCGAGGAGCCggagttggatggggacctccTGCAGCTAGACCACCCAAATGCCTTCGAGCCCATGGTGGACCACGAAGACCATGCGGCTCCCAGCAACTTCACATTGATGCTGGAGGCCGAGGACGGGGAGAACGGGCTGGCCGACTCGGTTTTGGAGGACGAGCACCTTCTGATCGTGGAGCTGCCTCCCTCTGCCGAGAACCGAACGGGAGACCAGAACGGGGCGAGTGAGCGagttgaggaggaggaggtcaTTAGCCAGGAGGAGATAACCCCGGAAGGTGTTGTGGACAAGGAGCGCCCCGAGCCGGTTCCAGAGACACTCCCATACGTTCCCGAGCCCATTAAAATGGCGATTGCGGAAAACCTGCTTGACGCTATCAAAGACACGAGGTCCAAAGAGTTTGCAGCGGAGCTGCTCGAGAGCTCTGTGCAGCCGGAGGTTCTGGTGACCGGTAGGAAAACCACATCCTTGACAACCACAACGATGACTTCTGAATCAGTCCGGGAAACGATTCACATGGGTTGTGGAGATGCGCTTGTGGAGGAGATGAGACGCACCAGAGGAGCGAGCATGTTGGTGGCCGAAGTGCCAATCTCAAGCGATCAGCCTGAGGCGGAGGAGgtgaagcagcagcaggaggaggcgGCTGTGAAAGATCTTCCGGCTCCAGCTCCTAGTCAGAAAATTGACGAGGAGGAGACATTGCTGGCACAGATGGACTTGCCAGTGCCTACCACTCCCAAAAGGGCTGGCAGGAGAAGGAAAAACACCCTGGACTCCACCTTCCCTGTTACTCCGAGGAGGAGCACACGGAACACCAGAGATGCCGAGTCAGACGAGGCCCTGGAAAACCCGGAGGCCCCaataaactccaaacttcaGACTCCGCAGAAATCGACGCCTCACAAAGGGGGCCGCAGAGCCAAGAATGCCGTCGTCGTCGAGCCCCCTGAAGATGTCCAGGAAAGGGATGGGCTTAATGATCAAGACATCCCGATGCCGGTCACTCCCACCAGGAGACGCGGCCGCCCCAGCGTCCCCTGTGTGTCTGAAAGCGCTCCGATGGTTCCCGATGAAATGGCTCTGGATCAGTCCGAAAAGAAGGTGCCTAGTAGTCCCAGCAGGTTGACCAGGAAATCGGTCACCCTTGAGATACCTCACCTGGCCAAGACTGAGGAGAAGGACACCGAGATTGCTGAGCAGGAGACACTCATTCCCCGGAAAAGAGGTAGGAAACCGAAAAACCTTGTCGCAGCAGAACAAGCCAAAACGGTGCAGAGCGAGCCACCGCGCACCCCTGGCAGAACGACGAGGAGCAGGTTGGCACTTGTGGTGGAGGTGCCCGAGAAGGAGCTCCCTCCACTTCCTGAAATCCTCCCACAGGACGAGCCAGGGCTGCCAGTGGCCGAGGATGCGTTGAAGAACAGACTGGAGGAGGAAAccagaggagaaggagaagaagcgATGGCACTGCTGGTCGAAGGTGAAGTGTCCATCAGGGATAACTTCCAAGACGATACTGGCGCTGACCAGAGACTCTCGGAGGCCACGGACAACACTCGGGGCCCCTCCTCTCCTACTGCCGGGCCCAGCGATGAACCCCCAACAGAGACGGAGGTCACAGAAGCAGCTGCAGGGACGGCCAAGGACGCGCCGAAATCACGCAAACCAGGCAGACGGGCGCGCCCAAGCAGACTTCCTCCCCCCGCCAAGGAATCCTTCATCTTCTCTCCTCCTCGGACACGGTCCAAAAAAACTAGAGCCAAAAAGTCGCCCGACTCTCCCGAGGCCCCTCCAGACTCCCAGCCGCAGTTTGTGTTTTCTCCTCCCACCACGCGGACCAGGCGGAAAATGGGACAGGAAATATCACGGAATATCACGGAAGACATGGAGCAGCAAGAGGTGCAGGATGAAGTCCCGAAGGTTTCTGAGGAGACGGACACTCGTGCtgcaaaaccaagaaaaaagCGAGCAGCCAGGGCCCCGAAAAAGGCGGTCTGGTCTCCCCCGCCGGTGGAAGTCAACCTGATCTCGCCCATGCCCAGCCCCGAGGAGCTCCCCAGGGGCAGGAGGAAGAAGCCTGAGGAGGCCGAATCCCCGCTGCAAAGGATGAACCTCCGCAGGAACCGAAAGAGACTGATGGACACCATTTTCCCAAAGCCTGTGACTCGCAGGAAGATGCTCTGATGtggtggatttgtttttttgttttttcctgaattttaataaatttgactgctgtttttttttcttctctatttaAGTGAAGTACCACCAGTTGGAactgttttgaattaattaacaaatctAAATTgggagaaaaataattttatataaattattgtacAATGACTTGAAAAAGCTGTATGTGCTGAGGTTGGTGTGGAGGAGGAGCTAATCTCCCAAATTGTGAGGGGaggattattttataaaacttcATTTATATAAGACATGatgcaaatgtaaatatcttttaggaatgttataaataaaaatacacttgcgaagttttctattaata

Function

GO: NA

KEGG:

id description
K25129 AHCTF1, ELYS; protein ELYS

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003729 True 7463 mRNA 0.56 36 16547072 16569703

Neighbor

gene id symbol gene type direction distance location
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding upstream 24486 16518106 ~ 16522586 (+)
AMCG00003727 NA coding upstream 119364 16415450 ~ 16427708 (+)
AMCG00003719 NA coding upstream 258370 16287662 ~ 16288702 (+)
AMCG00003720 mcm3 coding upstream 281374 16258454 ~ 16265698 (+)
AMCG00003718 NA coding upstream 336795 16207847 ~ 16210277 (+)
AMCG00003733 kif28p coding downstream 6685 16576388 ~ 16589499 (+)
AMCG00003737 NA coding downstream 82131 16651834 ~ 16660947 (+)
AMCG00003738 NA coding downstream 123867 16693570 ~ 16699348 (+)
AMCG00003739 NA coding downstream 278091 16847794 ~ 16850839 (+)
AMCG00003743 NA coding downstream 302940 16872643 ~ 16877245 (+)
G2797 NA non-coding upstream 116517 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 315574 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 461080 16085140 ~ 16085992 (+)
G2719 NA non-coding upstream 462206 16081182 ~ 16084866 (+)
G2698 NA non-coding upstream 514137 16032708 ~ 16032935 (+)
G2833 NA non-coding downstream 23561 16593264 ~ 16597369 (+)
G2836 NA non-coding downstream 29355 16599058 ~ 16599329 (+)
G2861 NA non-coding downstream 298596 16868299 ~ 16934020 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 638332 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 684563 17254266 ~ 17256450 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 507432 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1228844 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1680314 14851752 ~ 14866758 (+)
G2440 NA other upstream 2127340 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3340233 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 462867 17032570 ~ 17042594 (+)
G3047 NA other downstream 1112114 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1562216 18131919 ~ 18142633 (+)
G3108 NA other downstream 1576957 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2702262 19271965 ~ 19397686 (+)

Expression


Co-expression Network