AMCG00003731


Basic Information

Item Value
gene id AMCG00003731
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16535239 ~ 16543521 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003731
ATGGCAAGGCACAGGGCTGCGGGCCAGAGAGATATGATCATGAGAAACCTGTCCACTGCTCAGGGGCGCCTGGAAGTGCTGCAGGTCTACAAGCTGCTGTACTGCGTCTGCGAGAAGGACAAGGAGCAGATCGAGAAGCTGGTGAAGATGGGTGTCCCCAACCTCATCAACCTGTCGGAGCCCCAGAGCGGGAACAGCGTCCTACACTTGGCCGCGGTGGCCAACGACACGGAGATGTGCTCCTTCCTGCTGTCGCTAGGTGCCCAGTCCAACGTGCAGGATAGACTGGGCCGCACGCCGCTGATGAGGGCCGTGCAGCTGGGGCACGACAGCGTGGTGGCTGTTCTGGCTGAAGCCGGGGCCGACATGAAAATCGTGGACGTGGAGGGAAAAGGCAAGCTATCATACTGGGTTTTGTTCTACTGTATTTCCCCGACTAAAAGACACCTGCGCTGCCTTCAGATGGCCCTGAAGCACGATGCGGACGTCAACAACTGCTCCCTGAAGGGAAAGCCAGTGTTCCTGCTGGCCTGTGAGCAAGCCAAGGACTGCAACACTATGTGCATGAACATTTTGGAAAGAGGAGGTGATCCAAATGCAACGGATGAGGCCACAGGTCGGACTGCTTTGATGGAAGCAGCGAGGGCGGGGCATGCGGAACTGGTGCGCGCACTTCTCCAGAAGGGGGCTAACGTCAACAGTTTGGACAAGAAGCGAAACCACGCGGGGCACTTTGCGGCAGAAGGCGGCTTCTTTGAGGTGATTCAGATGTTCTCTGCATACTCAGCCGACCTGGGTGTGGTGGCTTTGGATGGGAACACACCGATTCATTACGCAGCCATAGGAGGCTTTGCAGATTGCTGCAAATTTCTCTCTCAGAGAGGTTGTAATCCCAAGCTCAAGAACCTGGAAGGGGCAACTCCCCGCATGCTGGCCAAGGAAGGCGGCCACAAGGCGGCCATGAAGGAGCTGAGGAAAGCAGAGAGGCTATACACCAAGCTTTCCAAGCTGGGAGCCGCCAACGCCAACGAGCCCTGGGCACTCCGACTCCACGACTGGTCCTTTGAAAATGAGGCGGCCTTGCGCAGTGCTTTCCAAGACACCAATGAAGGGGGGGATGGTGAGAATGTGCCGAAAGAGACTTTCATAGCAGTCCTGCTGCAGCACGGGGCGCCGGCGGACCTGGAGGAGATCCAGAAAGTAGTGATGGCCCACGACCGCAGCCGAGAGGGGACAATCAACATCACCGAGTTCCTGAAGGGCTCCAAGTTTCTGCAAAAGGCCTTCCTGATATCCTCCTACGGCcccaagaagaagaaagacaaaaagggCAAGAAGGGCAAGAAAAAGGGCAAGTTCTCCATCCCCATGCCCATCTGCACTGTCCCTGCCGAGCTCATATACCGCCGCGAAGACGGGGGGCCCCCCCAGTTTATGATTGAGAGCTACCAGCACCACACAGACACCAGCCGCTTCGACCGGGACCACCTGCCCGGACACCCTGTGGAGGATGACTCGGCCTGGTACATTGACGAACCCGAGAAGATTTACATCAACATCAACTACTGTGCCAAGACTGGGGATTTTGAGTCCCTGGACCTCGCATTCAGCCAGGGGGTGCCAGTGGATGTGAAGGACAAGTTCTACAAGACACCGCTGATGTGCGCCTGCGCCACCGGGAACTACGAGGTGGCCAAGTACCTGCTGGGCATCGGGGCGGACGTCAACTCCACCGATCAGTTCAGCTGGACGCCTCTCCATCACGCTTGTCACGCCGGGCAGCTGGACATCATCGATCTGCTGGTGAAGTCCGGAGCCTCCATCGATGCTCCGGCCATAAACGGGGCGACCCCACTGATGAGGGCCATAGAGAGCTGCCGGCCAGGATGTGTGGAGTACCTGATTGCAGCCGGGGCCAAGGTCCAGATAGAGAACAAGAAAGAGCAGAACGCCTTGGATATCGCCAAGGCTTACGCCGATTTCAGAATCATCGACCTCGTCCAGGCCAAGTTCGACACCCTCCCTAAGCCGAAGGACAAGAAACGAAAAGGGAACCCCCCCCAGAAAGCTAAAGCAGCTGTAAAAGACAAGGTTGTTGTGTCTCAAAACCCTGTGACGACCCCATCGTCTGACATGGGTGGGAAGAAAGAATCTCTGAGAGAGAGCATCATCTTTCAGAACCGTCGGATAACCAGCGGAGCCGTCAACAAAGTGGACATCAGCTTTGTGCCAAAAACAGTGTGGGGGAAGCAGCCAACGACGAGTCAGCTCATTAGAAAGAAACGGGAACAAAGAGAGCGCCACTCCTACGAAGTGGATTTCGAGGACTTCGTGATGCCCTTTCAGAAGAACATCATGCAGAAATCTCTCGAAATGGGAGGCGTAGAagactaaaacaataaacaccaaTCTGTAcatcagaaattacattttagttcaTGAGATTAACCCCCCCAACCCCGTGCTGGCTACTGCTTTCTGTCACTGCAAAGATTGACAAGTAAAATTAGACAACTGATTGATAATGTCAagaggatgatgatgataataataataataataataataataataataataataatatatttaaaaatagacacacCAGCACCTCAACATCAGTAGAAGTAGAATAGATAATACTGACCACAGCCTTCAGCTCTGCTAAACAATGCTCAGacatactatactgtactggaTACCTGAGGCACCACAGACTGGCCAAGACATTTATACTGGTGACCATACCTTACAGAGCACAGACAACGTGGTTTAACATacatacagacgtgctcaaatttgttggtacccttacaggtcattgaaataatgcttaattcctcctgaaaagctattgcatcatgtatacttgcatgcctttggtttgtcatagaataaagcaaagaagctgtgaaaagagatgaattattgctcattctacaaagatattctaaaatggtctggacacattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003731 True 2972 mRNA 0.52 9 16535239 16543521

Neighbor

gene id symbol gene type direction distance location
AMCG00003728 NA coding downstream 92713 16429027 ~ 16442526 (-)
AMCG00003725 gpn1,LOC107725955,LOC107729295,LOC107682285 coding downstream 215806 16308233 ~ 16319433 (-)
AMCG00003726 stmn4 coding downstream 234847 16292357 ~ 16300392 (-)
AMCG00003724 NA coding downstream 266736 16266900 ~ 16268503 (-)
AMCG00003723 NA coding downstream 276904 16251687 ~ 16258335 (-)
AMCG00003732 NA coding upstream 27009 16570530 ~ 16576587 (-)
AMCG00003736 sccpdh,LOC105911215 coding upstream 49915 16593436 ~ 16597326 (-)
AMCG00003735 NA coding upstream 100839 16644360 ~ 16651502 (-)
AMCG00003741 NA coding upstream 336515 16880036 ~ 16881122 (-)
AMCG00003740 kif26b,kif26ba,LOC107682227,LOC107693166 coding upstream 340451 16883972 ~ 16892879 (-)
G2765 NA non-coding downstream 284756 16247935 ~ 16250483 (-)
G2722 NA non-coding downstream 449244 16085115 ~ 16085995 (-)
G2720 NA non-coding downstream 450373 16079399 ~ 16084866 (-)
G2699 NA non-coding downstream 502317 16032687 ~ 16032922 (-)
G2697 NA non-coding downstream 505053 16029424 ~ 16030186 (-)
G2832 NA non-coding upstream 42541 16586062 ~ 16586266 (-)
G2834 NA non-coding upstream 44548 16588069 ~ 16588293 (-)
G2903 NA non-coding upstream 453269 16996790 ~ 16997604 (-)
G2902 NA non-coding upstream 497916 17041437 ~ 17042549 (-)
G2973 NA non-coding upstream 710750 17254271 ~ 17254765 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 943509 15515673 ~ 15591730 (-)
G2500 NA other downstream 1723908 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 2522218 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 2803200 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 3418579 13071796 ~ 13116660 (-)
AMCG00003734 NA other upstream 63889 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 324811 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 593727 17137248 ~ 17140382 (-)
G3181 NA other upstream 1399056 17942577 ~ 17944942 (-)
AMCG00003784 NA other upstream 1591858 18135379 ~ 18142681 (-)

Expression


Co-expression Network