AMCG00003737


Basic Information

Item Value
gene id AMCG00003737
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16651834 ~ 16660947 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003737
ATGGCCGCTCCCTGGTTGGCCTCAGGAGCCTTCCGGGTTGATTTCCGCACATGGGTGCTCAGGCGCAGGTCTTCGCCGGCTCTCAGCACCATGGCGCGCACACTGCGGCGCTTCTGCAGCCCGGGCAGAGGCAACGGGCTGCGGGCCGGCGCCCCGCTGCGGCCCGGGGAGCTGCTCTATGACTGTGAGCCGTTCGCCTGCACTGTTTCCCGAAAAGGCAGAGACCGTGACACCTGTGAGAGCTGCTTTGCCAGAAAACATGATGAGGTGAATATCTACAACTCTGAGCTCAGTTGCATGGTGGGCATCGGTCAGTTGGGAGCCCACTTGTCCTCTGATGggctggaggaggagcagaCTCTGAGGGAGCTGGAGAAATTAGAGGAGGATGCAGTCTCTGTGCCTGAACCCCCCCTGCAGGAAGCCCTGTTCACCCACCGCCTCTCCAGGGCATCAGCTAGGATGAGCTTACAGACCACTGACTTGGCTGATTGACCTGTTACCCGCAGAGACCCAGCGAGAGGCAGGATGTGCGCTGTGGAGGCCCCGCTGGTGGCTGAGGTGCGGTGCGGGGCTCCAGGAAAGCAGACGCATGAACCTGCAGGAGGCCAAGGGAGAAGAGGAAGGCAAAGTGGAAGATCCAGACCTCCTGTCTAGTGCTCCCCGGTCCTTCCTCATTGGTCTTCCTCCCTGGGCccaagcagagagagacacaaacacagagcccCCCCTCCCGATGGCACTTCAATCTGAGGAAACTCTGTCTGCTGGGAAACTGGTTGACTGTATAATAGGACTGTGGAGACCAGCCCATGTGATGAGTGTGGGACCTCACTCCAGCATCCCCAGTGCTCCCTTAAACTCTTATAGATCATCACGGTCCacatgtagtaataataatatagtgcaTCATCTCCTGACATGTCTGTGAGGTTTCCtatgagacacacacaggcccaGCACTATGCGTATCTTTGTAAAAAGCAAGTGCAGTTGAACTGTtgtgatattaaaatgacatttggtagaataataatatgataatagACACAACTTTAGCACAAACAATCACACAGTGgatcatatttcagttttattttgtgtaaacatCTGTTCAACCACACCTTTGGGGACTGATTTGTGAAGTTGTTTTAGTTGTAATGACTGTAATGAAATGTCTGGACACTAGATGACAGTGTTGCTGCTTGTCTGACTTAAAATCGAGCGCATCATGTCATTTCTGTAGCTGTTTCGGATACTCCAATACTCCAATCCCTGCTGTAATAAAATGGCCTGTGGTATAAATATGGCCTTGTCTGTCGAGCTGAGCCTCCTCACGGCTGACTCGTTCTGCATTTTCTCCGCTGCCTCTTGAAAACTGAATGGTTCAGGTCTTCTAATTCATCTCAgattttttaatgaatctgaCAAGCCTTCCGTCATCCTAGATTCACCAAACTACGTTGTGTGTTAGAGAGTAGTAGAGTTCAGGGATTTTTACCTTTGGCGTCCTGCAATTTCTCTCGTTAATTCACAAGATGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003737 True 1545 mRNA 0.51 3 16651834 16660947

Neighbor

gene id symbol gene type direction distance location
AMCG00003733 kif28p coding upstream 62335 16576388 ~ 16589499 (+)
AMCG00003729 NA coding upstream 82131 16547072 ~ 16569703 (+)
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding upstream 129248 16518106 ~ 16522586 (+)
AMCG00003727 NA coding upstream 224126 16415450 ~ 16427708 (+)
AMCG00003719 NA coding upstream 363132 16287662 ~ 16288702 (+)
AMCG00003738 NA coding downstream 32623 16693570 ~ 16699348 (+)
AMCG00003739 NA coding downstream 186847 16847794 ~ 16850839 (+)
AMCG00003743 NA coding downstream 211696 16872643 ~ 16877245 (+)
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding downstream 354717 17015664 ~ 17029628 (+)
AMCG00003750 NA coding downstream 417138 17078085 ~ 17104248 (+)
G2836 NA non-coding upstream 52505 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 54465 16593264 ~ 16597369 (+)
G2797 NA non-coding upstream 221279 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 420336 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 565842 16085140 ~ 16085992 (+)
G2861 NA non-coding downstream 207352 16868299 ~ 16934020 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 547088 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 593319 17254266 ~ 17256450 (+)
G3265 NA non-coding downstream 1777859 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 1884037 18544984 ~ 18545538 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 612194 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1333606 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1785076 14851752 ~ 14866758 (+)
G2440 NA other upstream 2232102 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3444995 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 371623 17032570 ~ 17042594 (+)
G3047 NA other downstream 1020870 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1470972 18131919 ~ 18142633 (+)
G3108 NA other downstream 1485713 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2611018 19271965 ~ 19397686 (+)

Expression


Co-expression Network