AMCG00003738


Basic Information

Item Value
gene id AMCG00003738
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16693570 ~ 16699348 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003738
AAACAGGCGTGGCCAGAACACAAGAGAGAATGCAAGTGTCTCCGGAGCCTCCATCCCAGAATCCCCACGGACTCCGTGCGGCTCGTCGGGCGCATGGTCTTCAGACTACTGAACTACTCGCCTTGCTCTTCTGAGGAGCTGTATTCCCTGTCAGAACATGAATCACatattaaaGAGATGAGTGAAGACAAGAGAGAAGGCCTGCGGCAGCTGACAGCGATGCTGCAGCTTTATTTGAGAGAGGAAATGGGCGATGTTTTAGACCTGCCACCTGGTTTAGATCTCTTCCACCTCTTCGCCAAAGAGGGAGAGCCCAGCGATGCACAGCCTTGTTCTGGCAGCCCAGGAGAGGtagtggtggaggaggaggagggggagggtttttga

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0060538 skeletal muscle organ development biological_process
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003738 True 387 mRNA 0.54 4 16693570 16699348

Neighbor

gene id symbol gene type direction distance location
AMCG00003737 NA coding upstream 32623 16651834 ~ 16660947 (+)
AMCG00003733 kif28p coding upstream 104071 16576388 ~ 16589499 (+)
AMCG00003729 NA coding upstream 123867 16547072 ~ 16569703 (+)
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding upstream 170984 16518106 ~ 16522586 (+)
AMCG00003727 NA coding upstream 265862 16415450 ~ 16427708 (+)
AMCG00003739 NA coding downstream 148446 16847794 ~ 16850839 (+)
AMCG00003743 NA coding downstream 173295 16872643 ~ 16877245 (+)
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding downstream 316316 17015664 ~ 17029628 (+)
AMCG00003750 NA coding downstream 378737 17078085 ~ 17104248 (+)
AMCG00003749 hpcal1,LOC106607246,LOC105015955,LOC107565203 coding downstream 404916 17104264 ~ 17108278 (+)
G2836 NA non-coding upstream 94241 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 96201 16593264 ~ 16597369 (+)
G2797 NA non-coding upstream 263015 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 462072 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 607578 16085140 ~ 16085992 (+)
G2861 NA non-coding downstream 168951 16868299 ~ 16934020 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 508687 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 554918 17254266 ~ 17256450 (+)
G3265 NA non-coding downstream 1739458 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 1845636 18544984 ~ 18545538 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 653930 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1375342 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1826812 14851752 ~ 14866758 (+)
G2440 NA other upstream 2273838 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3486731 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 333222 17032570 ~ 17042594 (+)
G3047 NA other downstream 982469 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1432571 18131919 ~ 18142633 (+)
G3108 NA other downstream 1447312 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2572617 19271965 ~ 19397686 (+)

Expression


Co-expression Network