AMCG00003739


Basic Information

Item Value
gene id AMCG00003739
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16847794 ~ 16850839 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003739
ATGCTGGCGGGGGACGAGCGTGCGGGGAGGGTGGTCAGAGAGGCCGTCACCACAGTGGAACAGCTTCAGGCTCAGCAACAGTGGGAGCAGGCCTTGGCGCTGTGCAAGAACGTCATACATAACCATGGAGACGTGCTTCCAGACAGCAACATCCATCTGGTGAAAATGCTCGACAGCGCCACGGACGCCTGTGTGAATCTGGCCCGGTGGGACGGCGCTCTGCACTACAGCACCCGAACCTTGTGGGCATACGGTGCATCTGTAGAAACTGTTCAGATGATCCCACTGGGACAGGGCAGCCACTGGGCGTCCACTCTGTGGAGCCTGGCAGTGTGGGAAGACATTGCTGTTCCAGATGCCTTCAGCTGCCACCAGCCCATTATCCAGAGTGTGGCTAACAGGATGCCTGGGCCCATGCAGCGATTTTGTGTTGCCTGA

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0060538 skeletal muscle organ development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003739 True 438 mRNA 0.59 3 16847794 16850839

Neighbor

gene id symbol gene type direction distance location
AMCG00003738 NA coding upstream 148446 16693570 ~ 16699348 (+)
AMCG00003737 NA coding upstream 186847 16651834 ~ 16660947 (+)
AMCG00003733 kif28p coding upstream 258295 16576388 ~ 16589499 (+)
AMCG00003729 NA coding upstream 278091 16547072 ~ 16569703 (+)
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding upstream 325208 16518106 ~ 16522586 (+)
AMCG00003743 NA coding downstream 21804 16872643 ~ 16877245 (+)
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding downstream 164825 17015664 ~ 17029628 (+)
AMCG00003750 NA coding downstream 227246 17078085 ~ 17104248 (+)
AMCG00003749 hpcal1,LOC106607246,LOC105015955,LOC107565203 coding downstream 253425 17104264 ~ 17108278 (+)
AMCG00003752 NA coding downstream 310901 17161740 ~ 17205182 (+)
G2836 NA non-coding upstream 248465 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 250425 16593264 ~ 16597369 (+)
G2797 NA non-coding upstream 417239 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 616296 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 761802 16085140 ~ 16085992 (+)
G2861 NA non-coding downstream 17460 16868299 ~ 16934020 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 357196 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 403427 17254266 ~ 17256450 (+)
G3265 NA non-coding downstream 1587967 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 1694145 18544984 ~ 18545538 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 808154 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1529566 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1981036 14851752 ~ 14866758 (+)
G2440 NA other upstream 2428062 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3640955 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 181731 17032570 ~ 17042594 (+)
G3047 NA other downstream 830978 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1281080 18131919 ~ 18142633 (+)
G3108 NA other downstream 1295821 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2421126 19271965 ~ 19397686 (+)

Expression


Co-expression Network