AMCG00003741


Basic Information

Item Value
gene id AMCG00003741
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16880036 ~ 16881122 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003741
ATGCAGGAAGGTCCTTGTCCAGACACATGGCTCATGAaccagaaaaaactaaaccaggAGATTGATCAGGTTGAGACCTTGTCTAGGCAGGAGGTAGCACCTCTGATTTGCAGGATTCTGGGAAGTGGGATCAGTGCCCAGTGCTTTCTGAAGGACCCCCAGCTCCAGCTTGTAACCACAGTGAGTTCTGACATCAACAAACTCCCGTCTTCTGTGCGCAGGGACAGCAAGCTCACCATGCTGCTCCGCGAGTCGCTGGGCAACATGAACTGCCGGACCACCATGATCGCACACATCTCCGCCACGCCCAGCAGCTTCGCCGAGACGCTCTCCACCATCCAGATCGCCTCGCGGGTTCTgaggatgaagaagaagaaaaccaaaTGTGTGCCCCTGGGTAAAGAGCTAATCATGCCATGA

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003741 True 420 mRNA 0.54 3 16880036 16881122

Neighbor

gene id symbol gene type direction distance location
AMCG00003735 NA coding downstream 228534 16644360 ~ 16651502 (-)
AMCG00003736 sccpdh,LOC105911215 coding downstream 282710 16593436 ~ 16597326 (-)
AMCG00003732 NA coding downstream 303449 16570530 ~ 16576587 (-)
AMCG00003731 NA coding downstream 336515 16535239 ~ 16543521 (-)
AMCG00003728 NA coding downstream 437510 16429027 ~ 16442526 (-)
AMCG00003740 kif26b,kif26ba,LOC107682227,LOC107693166 coding upstream 2850 16883972 ~ 16892879 (-)
AMCG00003747 kif26b,LOC102197193,LOC107097817 coding upstream 111997 16993119 ~ 16994022 (-)
AMCG00003748 NA coding upstream 117658 16998780 ~ 17013774 (-)
AMCG00003746 NA coding upstream 162512 17043634 ~ 17047025 (-)
AMCG00003753 NA coding upstream 324191 17205313 ~ 17229181 (-)
G2834 NA non-coding downstream 291743 16588069 ~ 16588293 (-)
G2832 NA non-coding downstream 293770 16586062 ~ 16586266 (-)
G2765 NA non-coding downstream 629553 16247935 ~ 16250483 (-)
G2722 NA non-coding downstream 794041 16085115 ~ 16085995 (-)
G2720 NA non-coding downstream 795170 16079399 ~ 16084866 (-)
G2903 NA non-coding upstream 115668 16996790 ~ 16997604 (-)
G2902 NA non-coding upstream 160315 17041437 ~ 17042549 (-)
G2973 NA non-coding upstream 373149 17254271 ~ 17254765 (-)
G2972 NA non-coding upstream 376815 17257937 ~ 17259543 (-)
G3170 odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 non-coding upstream 1054718 17935840 ~ 17940712 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 8561 16868332 ~ 16871475 (-)
AMCG00003734 NA other downstream 251635 16607410 ~ 16628401 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 1288306 15515673 ~ 15591730 (-)
G2500 NA other downstream 2068705 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 2867015 14009458 ~ 14013021 (-)
AMCG00003751 NA other upstream 256126 17137248 ~ 17140382 (-)
G3181 NA other upstream 1061455 17942577 ~ 17944942 (-)
AMCG00003784 NA other upstream 1254257 18135379 ~ 18142681 (-)
AMCG00003782 ctsb other upstream 1265538 18146660 ~ 18152381 (-)
AMCG00003825 NA other upstream 2480696 19361818 ~ 19373225 (-)

Expression


Co-expression Network