AMCG00003743


Basic Information

Item Value
gene id AMCG00003743
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16872643 ~ 16877245 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003743
ATGCGCCGCCCCACCCAGCTGAGGCCTTTCCATTCCCGCAACGTGGTCGACCCGGACCTGCCTCTCCTGCACCTGTCCAGCGACCCAGACTACTCCTCCAGCAGCGAGCAGTCCTGTGACACGGTCATCTACGTGGGCCCCAATGGCTCTGCCCTCTCTGACAAGGAACTAACCGACAATGAGGGGCCACCGGACTTTGTGCCCATCATCCCGTCACTGCAGAAGAACAGGACAGAGCCGGGAAAAATGccacagcagccacagcagccCCAGCCTCAGCCGCAGccacagcagccacagcagcagCCACAGGAGGAGAGTGTGGAAATGGGCAAGCACGAGAAGGACTGCCTCAAGTGCAACACCTTCGCCGAGCTGCAGGAGAGGCTGGAGTGCATCGACGGGAGCGAAGAGGTCAGCAAGTTCCCCTTCGAAGAGGTGCCCACCAGCCGGGGGAGCAAGTACGAGTTGGCTTCTGTGCAGGGGCTGGAACTAAAGACGGCCTCTGAATGTCACGTGGCCGTGGCCCTCGGTGGGCTAGAGACGATCAAAGAAGCAGCGGAGGGTGTTGCGGCCAGTCCGAGCCAAACCGAAGGCATGCCAGTGCCTTTGCCGAGTAGCTCCACTCTTTCTTCCAACAGGAGTGTGCCgggcagcagtagcagcagcagcatgcaGGCTGTGTCTCAGCAGAGGACACAGAATGCCTCTCTGCATGGCAGCAGAGAGTCACTCAGCACGGCAAGCTCTGGGGAAGCCAAACCACGGACCATGGGATCCCCCAGGCTGGGCATCGCCAGCTTGACCAAAACCTCGGAGTACAAGCCGCCTCTCTCCCCGTCGCAGCGCTGCAAGGTGTACACCCAGAAGGGGGTACTGCCCGGTGTGGCCCCGCCATTGACACAGGTCTTGAACAAGGATGGCAATGGACTGTCCTCCACAGAGTCCCTGCTGCAGCCCGAGCCCCGCACCTCACCAGTGGGGATGAGCCCGCAGGTCATGAAGAAGTCTCCATCgttgtcttcctcctcctcagacAGTGTGGAATTTGCAGAGCCCTCGCTGGAAGAGCCTTCATCTCAGCAGCAGCCACCCGCGGAGAACAAGAAGGAAGTGATGAGCACCACCACGGTGACGGTGCAGCAGCCCCTGGAGCTGAACGGGGAGGACGAGCTGGTCTTCACCCTGGTGGAAGAGCTGACCATCAGCGGGGTGATGGAAAACGGGCGGCCCACCAGCATCATCAGCTTCAACAGCGACTGCTCCGTCCAGGCCCTGGCCTCCGGCTCCAGACCGGTCAGCATCATCAGCAGCATCAGCGAGGATCTGGAGTGCTACGCCAGCACCGCTGCAGCATCCACTGCAGCGGCCATCTCGGAAGTGGCCATCACTAAGTTCCTACCagtgcccaagggggagggagaggCCATGACGTCCACCAGCCGCCGCTCCTCCATCAGCTCCTGGCTGAGCGAGATGAGCACAGGCAGCGATGGGGAGCAGTCCTGCCACAGCTTTGTCGCACAGCCCTGCTACGGGGAAGGGGAAGCCCTGGCTGATCCCGCCCTGACCGACCTGTCTGACGGCATGCAGGACGACTGCATCCTCTACCTGAGCGCGGGGAAGGGTGCGGATGGCGAGGGCCTGCTGACTGCTGCTGCGGAGAAGATTCACGAGATGAAAAACCTCCCCAGCAAGGTGTCTCCTCTCAGAAACTGTAAGGTGTCTACCGTGGGCAAAACCACAGTCACCATCTCCAACATGACGGCTGTGGGGGTGTCCGATGGCTACACCCCCATAAAGGCGAACATCAGCATGCACCCCTGCATCTCTCTGAAAACAGGATCCCTGCCGGACTCTCCGCAGCTGTGTCCCTATGTAAAGCCCCCCCAGGTTAGAGATACCAAAGCACCAGCTGTCCCCGTCATCGGCGACATCAAATTTGACGATCCCTGGCTGAGGAGAGAAGAAAACGACGAGTCCAGAGCGAGGGAAGTCATTACAGAGAAAAGGGCCTCAGATTCCTTGAGGAGCTGGAGCTCCGCCGACAGGTCCAGCTCCAGCAGTGGGGAAGCAGCCGGTTCTCCTGTGCACTCGGAGCACCTCAAGAGGGTGGTGGATGGGTGCGAGATGTCCCTGTCCATCTCAGAGAGCCTGACTCCCATTTATGCAGCCGAGGTGCTCAGGACAGGAAGCCTGCCCAGGGGTTGGCACCGCCTGAACAGGCAGGACGATGCCGAAGAGGCCTCGCTGCGATTTCTGGGTGGGGACTGTAAGGGCTTGGGAGTCACCACCTCCACCCCTTGTAGCCCCAGAGCCACTCTAGAGAGGAGGGGGGCATCAGCCAAGCAGTGTGTCCTGGCCAGGCCTAAAGGAATCCCACCGCTACCACCAGTGCGAAAATCCAGCCTGGATCAGAGGAACAGGGCAAGCCCCCAGCATGGCACAGGCAGCAGCCAAACCTTGAGCCACACGCTGTCTTTCTTGGGCAGTACCCCCGAGGACTTGGGCAGCAATGGGAAAGTGAAAGGCCCTAACGTGGAGAGCAGCAGCAGGCTCTTTAGCGCAAAGCTGGAGCAGCTGGCCAACAGGACCAACTCCCTGGGAAGGAGCCAGACCGGACACTATGACTGCCTGTCGCTGGAAAGGGCAGAGAGCCTGACTTCCGTTGGCTCCAAGAATAGCCTAGGGAGAGAGAGCACCATGCCCAGGGCTGGCCGGAGCCTGAGCCGGGGCTCTGTGTCCTCACCCACGGCTTCCAATGGGAACAACAACACGCCTCAGTCACCCAAGGCCACCCAGTCCAAGATTTCAGCCGTCAGCAAACTCCTCCTCGCTAGCCCCAAAGCCCGAAGTCTTTCGGCCTCCAGTACCAAAACGCTGAGCTTCTCCACCAAGTCCCTCCCGCAGTCCGTGAACAGGAGCTCCAGCCTGCCCCCCAATGGCAAGAACCAGATCTCCTGGTCCACTCAGTCCCTCAGCAGGAACCGCGGATCGGGGTTGGCCTCCAAGCTGCCCCTGAGGGCAGTCAACGGGCGCATCTCTGAACTGCTACAGGGCAGCGGTAGCGGGGGTGGTGGCTCTCGGTCTGGCCACGCCCGTGGGAACTCAGACTCCGAGGAGAGAGCAGGGCTCCCTGGAGAGGAGAAGCCCGTCGTTCACACACTGCCCTCCCCCTACAGCAAGATCACGGCCCCGCGCAAGCCGCACCGCTGCAGCAGTGGCCACGGTAGCGACAACAGCAGCGTCCTGAGCGGAGAGCTGCCCCCCGCCATGGGCAAGACAGCCCTGTTCTACCACAGCGGGGGCAGCAGCGGCTATGAGAGCATGATCCGAGACAGCGAGGCCACGGGCAGCGCCTCCTCCTCCGCCCAGGACTCCATGAGTGAAAACAGCAGCTCTGTCAGCGGACGCCGGAGCCTCAAAAACCCAAAGAAAAGGAACAACACAGGGACTGGCTGTAGCCCCCTTCTGAAACGGCAACACTGA

Function

GO: NA

KEGG:

id description
K10404 KIF26; kinesin family member 26

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003743 True 3489 mRNA 0.61 2 16872643 16877245

Neighbor

gene id symbol gene type direction distance location
AMCG00003739 NA coding upstream 21804 16847794 ~ 16850839 (+)
AMCG00003738 NA coding upstream 173295 16693570 ~ 16699348 (+)
AMCG00003737 NA coding upstream 211696 16651834 ~ 16660947 (+)
AMCG00003733 kif28p coding upstream 283144 16576388 ~ 16589499 (+)
AMCG00003729 NA coding upstream 302940 16547072 ~ 16569703 (+)
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding downstream 138419 17015664 ~ 17029628 (+)
AMCG00003750 NA coding downstream 200840 17078085 ~ 17104248 (+)
AMCG00003749 hpcal1,LOC106607246,LOC105015955,LOC107565203 coding downstream 227019 17104264 ~ 17108278 (+)
AMCG00003752 NA coding downstream 284495 17161740 ~ 17205182 (+)
AMCG00003755 NA coding downstream 652152 17529397 ~ 17552735 (+)
G2836 NA non-coding upstream 273314 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 275274 16593264 ~ 16597369 (+)
G2797 NA non-coding upstream 442088 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 641145 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 786651 16085140 ~ 16085992 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 330790 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 377021 17254266 ~ 17256450 (+)
G3265 NA non-coding downstream 1561561 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 1667739 18544984 ~ 18545538 (+)
G3370 NA non-coding downstream 2068337 18945582 ~ 18946131 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 833003 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1554415 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 2005885 14851752 ~ 14866758 (+)
G2440 NA other upstream 2452911 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3665804 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 155325 17032570 ~ 17042594 (+)
G3047 NA other downstream 804572 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1254674 18131919 ~ 18142633 (+)
G3108 NA other downstream 1269415 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2394720 19271965 ~ 19397686 (+)

Expression


Co-expression Network