AMCG00003750


Basic Information

Item Value
gene id AMCG00003750
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 17078085 ~ 17104248 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003750
ATGCGCTCCATCCTACGAGTAAAATGGGCTCTAGGGCAGCAGGGTAATcacaAGAACCATGACACACACATCCAGATCATTCCTGTGTCCTTCATCACATCTGCTGGGTCCGCAGTGCCAAGGCAGCGCTCACACTTCCTCGCTGATGAGGCACGGCTCACGGCATTTCAAACACTCCACTTCCTGTCCCCGGAGAGCTTCCTGCCCGCTTGCTTGACGACACCAGCAAAAGCATTGCTCATGGCCGGGCTGGGGGCAGACGGGCTGACTGGAGtttcGGCTGCACAGAAGGTTACTTGTAGCTCTGTTACCTGCTATTCTGACACTACAGGCCCTGCTCCAGCCATGGCCCCTGGAGTGCTGAGGCCCTGTGCTGAAAGGGCCTGTGAGATCATCTATGGGCCCTGTGGCAGCACCTGGCTGAGCTGGCCGTCCCTATCGGAGTTTGGCCCCCAGGCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003750 True 462 mRNA 0.58 7 17078085 17104248

Neighbor

gene id symbol gene type direction distance location
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding upstream 48457 17015664 ~ 17029628 (+)
AMCG00003743 NA coding upstream 200840 16872643 ~ 16877245 (+)
AMCG00003739 NA coding upstream 227246 16847794 ~ 16850839 (+)
AMCG00003738 NA coding upstream 378737 16693570 ~ 16699348 (+)
AMCG00003737 NA coding upstream 417138 16651834 ~ 16660947 (+)
AMCG00003749 hpcal1,LOC106607246,LOC105015955,LOC107565203 coding downstream 16 17104264 ~ 17108278 (+)
AMCG00003752 NA coding downstream 57492 17161740 ~ 17205182 (+)
AMCG00003755 NA coding downstream 425149 17529397 ~ 17552735 (+)
AMCG00003759 NA coding downstream 472486 17576734 ~ 17577808 (+)
AMCG00003760 dnajc27,LOC106605409,LOC107733160,LOC107752776,LOC107674103 coding downstream 514176 17618424 ~ 17622439 (+)
G2861 NA non-coding upstream 144065 16868299 ~ 16934020 (+)
G2836 NA non-coding upstream 478756 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 480716 16593264 ~ 16597369 (+)
G2797 NA non-coding upstream 647530 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 846587 16229935 ~ 16231498 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 103787 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 150018 17254266 ~ 17256450 (+)
G3265 NA non-coding downstream 1334558 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 1440736 18544984 ~ 18545538 (+)
G3370 NA non-coding downstream 1841334 18945582 ~ 18946131 (+)
AMCG00003744 NA other upstream 35491 17032570 ~ 17042594 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 1038445 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1759857 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 2211327 14851752 ~ 14866758 (+)
G2440 NA other upstream 2658353 14418516 ~ 14419732 (+)
G3047 NA other downstream 577569 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1027671 18131919 ~ 18142633 (+)
G3108 NA other downstream 1042412 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2167717 19271965 ~ 19397686 (+)
G3751 NA other downstream 4444953 21549201 ~ 21549533 (+)

Expression


Co-expression Network