AMCG00003756


Basic Information

Item Value
gene id AMCG00003756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 17555957 ~ 17565405 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003756
ATGAACATCCTACTGCTTCACACTCCTGTCTTCCTGGTGGTCTGGAGTTCCTGGCTGATGGTTCGTGGGAACGACACCGAATTCCATGAGAACACTCAGCGCATCAGCAGTGGGCTCATCCAGTGCGGGGAGTACAGCAACCAGGCCCTCCCCAACGGGAAGTGCCGGATCATGGCTACCCTGCCACAGCTGGACGAGCAGAGATGCCCGGACATGTTCCGCTGCACGGACGAGGTGTCCTACTGGCTGCACGAGAACGAGGAGAGGAAGCAGCAGATCCTGGACCTGAAGGAAACCATCTCTGAGCTGCAGGAGGAGCTCCGGAACCACCGGCACCGCATCAAAGTGCTGGAGCTCCAGAACGAGGAGAGGAACAGTCTGAACTCGTCTCTGGAGCACCGCTTCCGTGAGCTGGAGCAGCACTACGCCGAGGCCAACACGCTGCTGCACATCCACGGCTCGCTGGTGTACGACCTGCAGGCGCAGATACACAACCTGTCCATGACGGTGGAGAAGGTGCGACGCGACCCGGGCTGCATGATCAACATCGTCCGTGGGCCCCTCATCAGCCCCCAGAAGGCCCTGCACCCAGAAATCCAGCACGTGAGAAACTGCCCGATAGACTGCGCCTCCATTTACTATAATGGAGTGAGGAGGACGGGGATCTACACTGTGGTCCCGTCGATGGGAGGACTGCCCGTGGAGGTGTTCTGTGACATGGAGACTGAAGGTGGGGGGTGGACCATGATCCAGAGGCGGCAGGACGGCTCAGTCAACTTCAACCGCAGCTGGAAGGAGTACAAGGAGGGCTTTGGGGACATGCACACCGAGTTCTGGCTGGGCAACGACTACATCCATGACATCTCCTCACAGGGGGACTACTCCCTGCGCATCGACCTGGAGGACTGGAACAACAAGCACAAGCACGCCCTGTACGAGAGCTTCAGCATTGAGGAGGAGGCTAATCACTATCGCCTCCATGTGAATGGGTTCAGTGGGACGGTGGAGGACTCCTTCAGCTGGTATCACAACAAACGCAGCTTCAGCACCCCTGACACCGGCAACATCTGCGCCGAAATATCCCATGGTGGCTGGTGGGTGGCCGGAAAGAACCTGCTGGGACCTGACGGAATCGTGTGGTACGCCTGGAAGGACTCGGACTACTACTCCATGAAGAAAGTGAGCATGATGATTCGGCCCCGCACATTCCGCCCCCGGCTCTCTCCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003756 True 1230 mRNA 0.59 7 17555957 17565405

Neighbor

gene id symbol gene type direction distance location
AMCG00003758 NA coding downstream 29300 17514516 ~ 17526657 (-)
AMCG00003757 rps6kc1 coding downstream 42486 17469340 ~ 17513471 (-)
AMCG00003754 prox1a,LOC107592773,LOC107752784 coding downstream 264007 17275642 ~ 17291950 (-)
AMCG00003753 NA coding downstream 326776 17205313 ~ 17229181 (-)
AMCG00003746 NA coding downstream 508932 17043634 ~ 17047025 (-)
AMCG00003762 LOC106608035,LOC105008239 coding upstream 12966 17578371 ~ 17599733 (-)
AMCG00003766 NA coding upstream 79139 17644544 ~ 17668847 (-)
AMCG00003765 NA coding upstream 115041 17680446 ~ 17703226 (-)
AMCG00003764 NA coding upstream 214074 17779479 ~ 17784590 (-)
AMCG00003768 NA coding upstream 224534 17789939 ~ 17791057 (-)
G2972 NA non-coding downstream 296414 17257937 ~ 17259543 (-)
G2973 NA non-coding downstream 301192 17254271 ~ 17254765 (-)
G2902 NA non-coding downstream 513408 17041437 ~ 17042549 (-)
G2903 NA non-coding downstream 558353 16996790 ~ 16997604 (-)
G2834 NA non-coding downstream 967664 16588069 ~ 16588293 (-)
G3170 odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 non-coding upstream 370435 17935840 ~ 17940712 (-)
G3257 NA non-coding upstream 844465 18409870 ~ 18418066 (-)
G3266 NA non-coding upstream 873696 18439101 ~ 18439510 (-)
G3270 NA non-coding upstream 979948 18545353 ~ 18545976 (-)
G3354 NA non-coding upstream 1310177 18875582 ~ 18878573 (-)
AMCG00003751 NA other downstream 415575 17137248 ~ 17140382 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 684482 16868332 ~ 16871475 (-)
AMCG00003734 NA other downstream 927556 16607410 ~ 16628401 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 1964227 15515673 ~ 15591730 (-)
G2500 NA other downstream 2744626 14810786 ~ 14811331 (-)
G3181 NA other upstream 377172 17942577 ~ 17944942 (-)
AMCG00003784 NA other upstream 569974 18135379 ~ 18142681 (-)
AMCG00003782 ctsb other upstream 581255 18146660 ~ 18152381 (-)
AMCG00003825 NA other upstream 1796413 19361818 ~ 19373225 (-)
G3517 LOC101154678 other upstream 1859558 19424963 ~ 19425366 (-)

Expression


Co-expression Network