AMCG00003758


Basic Information

Item Value
gene id AMCG00003758
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 17514516 ~ 17526657 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003758
ATGACTCTTCTCCTGCTGCTCTCGCTCCTATCCCTTCTCTGCTGCGGACAGGTGGAGGCACAGATCAACCCAGCGCTGCCCTTCAGGGAGTATCTGGACCCAGGCCAACTAGTCTCTCTCAGCTGGGGTTTCGATGTTCAACAGGACCTCATCACCTTCGAGCTGAGCATCGGGACCATGGGGTGGGTGGGCCTTGGCTTCAGTGACAATGGAGGCATGGCGGGGTCAGATATAGTGATCGGAGGAGTCTTCCCCAATGGCAGCCAATACTTTAAGGACCGCTATGCAACCGGCAACACTCTACCCTTGGTGGACCCTCAGCAGGACTATACCCTGCTGTCTCTGAGTGAGAGGGATGGGAAGACAACTTTGCCAATAAAACTGATCTACGCTTATGGGCTGAATGATGAAATCACACACCATTCCGGCCGGAGAGGAACGAAGGAAATCAGCCTACTGGGCTACGTACCGAGGTCCACTCCCACAACTACCAATCATTTTGACATCACAGCCAACAATTTCACTGTCCCACCAGTACACACCTACTACTACTGCCGGATTATCAAAGCCCCTAATCTGGGAAGAAAGAACCACATCTATCAGATTGAGCCCATTGTTGACCACGTGGACCTGACCCATCACATGCTGCTGTACGGGTGCTCTGCCTCAGTCAATCAAACTCTGGAGGGGATGTGCTATTCAAACAACATGTCTCCATTTAACTTCTGTTTTAAGGTCATAGCAGCCTGGGGCATAGGAGGAGGGCTTTTTGACCACGATGTGGGGACCCTGCACATTGGACTTGACCTCATCCCTGAGTACATGCTGCCCCCAGACACCCAGTCCTTTAGGAGCTATGCTGTGTGCAACACTTCCATTTTCTCCAAGGTGCTCCCTGGCTCTTTTCCTGATATGAATGTCTTTGCAGTTCTGCTGCACACACATCTGGCAGGACGCAAAATGAGGGTGGCTCAGTTTAGgaACGGAGAACAAATTGGTTTCTTGGGCGTGAAcgaaaattatgattttaatttacaagAATTCAAATACTTGGGGCAAACTGCAATAATAaaagagGGAGATGAAATGGTGGTGGAATGCACATACAACACGAAGAATCGCAGCAAAGTTACCAACCTTGGACTTTCCACCACAGAGGAGATGTGTTATGCTTTCCTGCTGTATTATCCTGCCACAGATATCAGTTTTTGCTGGAGTGTACCAAACATGACCCAGGTGGGGGCGTCTCTGCAAGCTACAAACAAAGTGGCAGCAGGTGCAAATCTGATGACAATGACATGGAATGAGTCCTCAGTCCAAAGCTATCAGAACCTCCTGCATAACGTCAGCCAGGTTGTGTTTGTGGGATCTACTGTGCATGGATTTGCTGCCCAAACTGGGTTTGTCCGTGACATAAAGGCCACCCCATCTCTGAGCTGCAAAGCTTCTTCCAGTGAGGCAGGAAGTACGGTTTCAACTCATGGCAAGGCCAAGTGGACTCAAGCCACCCTGctctccctcctgctcctctGGCTAGCTGTCCTGCATTAA

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003758 True 1551 mRNA 0.50 12 17514516 17526657

Neighbor

gene id symbol gene type direction distance location
AMCG00003757 rps6kc1 coding downstream 1045 17469340 ~ 17513471 (-)
AMCG00003754 prox1a,LOC107592773,LOC107752784 coding downstream 222566 17275642 ~ 17291950 (-)
AMCG00003753 NA coding downstream 285335 17205313 ~ 17229181 (-)
AMCG00003746 NA coding downstream 467491 17043634 ~ 17047025 (-)
AMCG00003748 NA coding downstream 500742 16998780 ~ 17013774 (-)
AMCG00003756 NA coding upstream 29300 17555957 ~ 17565405 (-)
AMCG00003762 LOC106608035,LOC105008239 coding upstream 51714 17578371 ~ 17599733 (-)
AMCG00003766 NA coding upstream 117887 17644544 ~ 17668847 (-)
AMCG00003765 NA coding upstream 153789 17680446 ~ 17703226 (-)
AMCG00003764 NA coding upstream 252822 17779479 ~ 17784590 (-)
G2972 NA non-coding downstream 254973 17257937 ~ 17259543 (-)
G2973 NA non-coding downstream 259751 17254271 ~ 17254765 (-)
G2902 NA non-coding downstream 471967 17041437 ~ 17042549 (-)
G2903 NA non-coding downstream 516912 16996790 ~ 16997604 (-)
G2834 NA non-coding downstream 926223 16588069 ~ 16588293 (-)
G3170 odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 non-coding upstream 409183 17935840 ~ 17940712 (-)
G3257 NA non-coding upstream 883213 18409870 ~ 18418066 (-)
G3266 NA non-coding upstream 912444 18439101 ~ 18439510 (-)
G3270 NA non-coding upstream 1018696 18545353 ~ 18545976 (-)
G3354 NA non-coding upstream 1348925 18875582 ~ 18878573 (-)
AMCG00003751 NA other downstream 374134 17137248 ~ 17140382 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 643041 16868332 ~ 16871475 (-)
AMCG00003734 NA other downstream 886115 16607410 ~ 16628401 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 1922786 15515673 ~ 15591730 (-)
G2500 NA other downstream 2703185 14810786 ~ 14811331 (-)
G3181 NA other upstream 415920 17942577 ~ 17944942 (-)
AMCG00003784 NA other upstream 608722 18135379 ~ 18142681 (-)
AMCG00003782 ctsb other upstream 620003 18146660 ~ 18152381 (-)
AMCG00003825 NA other upstream 1835161 19361818 ~ 19373225 (-)
G3517 LOC101154678 other upstream 1898306 19424963 ~ 19425366 (-)

Expression


Co-expression Network