AMCG00003775


Basic Information

Item Value
gene id AMCG00003775
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 17942587 ~ 17950139 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003775
GTTTTTATCCCTGGATGTATCAATTGACGAGTTCACAAAATAACCTTGTTTTTTCGCCATTCGCAAAGAACATCTTTATGTGACATTTTCAAGTTCGCCGGAGAAAACAAGTTAGATAATAGAAGCGTCCAGGTTGCTGGGAGAAGGACAACAATTAATCAATCCGAGTCCGTTGATGTTTCTTGTAAAGGCAGGTTTGGGGGCAGCTATGTGTGGGTCCTAGCGAGCAGTGGTCGGAATAGTCATTCTGTATTGGTTTGACATCGCCGGTTTACATTCGTGTTGTCcttacaaatacatgtataaacgATTGTTTGCGTGTGGTATTCGTGTCTATTTCGCGAGCAATAAAAATACGTTTAATTTCGTCTGCAACTGGTACAAGTGGTCAAGTACATAGCGAAGGTCGGATTTATTTGAATACACGGGCGTTAAGATCCTAGTCCTCCGTTTTCTGTATGACGGGACCGCTACTTCCGCTTTGCTACACTtacagtactactactactactatattaactttaattgatAAGGGATCATTTTGCTTAATGTCGAATGTGATGCaactattcatttaaatgtatccattcaAATGTTTACAAGACTGGTTGTACTGTGACATAGGAAACGGCAGACCGGCGGTAGCTTTTGATAACATACAGCACTGTTGACCGGATAATGGGAACCctgttttatttgaacattataataatatacacgTTTTAGTCACCCTACCTCGACTTAAGCGCCCTTCTGTTTcgttatattgcatttatactATCCCGTCTATCTGCATTAGTGAACCTTTTCTGGACCGCCTGTTGTagaaaaagcacatttcagTCAGTTGGCTGTCGGAGTGAAAAAGTAACAACTCGGTCGTTTTACGCGTAAACCAGCCGTGTATCCCAAAAGTTCCATCTCAGAAAACcaacctgttgtcactttcagcTATTTTATAATTTCCTGTTGGTGATTATGTGGGCCATGTCGGTCATGCAAGTTATCCACGATGAAGTGTTTGAACTGTGTACGGACTACCTGAGCAGGCCCTATGCGCTGGGCCTGGCCGCTGTCTCGGCCTTCGTGTACTACCTGTGGGGCTCTCAGGGGCAGATGCCTGTGTTGGTGTGCAGCGATGGCTTCCGGGTGTTCCTGGAGCAGCACTGCCCTGTGGTGGCTGAGCGCTTCATTCCCACACCCTGGTGCTGGGGTGGCCGTGTGCAGACGCTGGCTCGCGTCCTCATCAAATCCAGCCCTTCCGTCTCCTACAGGAATGAGCTGATCAGGACAGTGGATGGGGGTCAGATCTCCCTGGACTGGGTGGATAATGTGGACAGTGTTTCGTACCCAGACAGCATATCGCGGcccacagtgctgctgctccCCGGACTGACAGGGAACAGCCGGCAGACCTATGTCCTGCATGCAGTCAGACAAGCCACGCGCAGAGGGTACAGcatgcTGCTGCTGAACTATCTTGCCCGAAAGGGTAGTGAGGCAGGGTTGCTGGCAGGGCTCACCATGTCTGTGAGCTGGGACACGCTGGAGTCCTGTGCCTCGCTGGAGCAACCAATCAACAGACTGCTCTTCAACCGCCACCTCACCGGAAACCTGCGCAGGACGATCACCAGGCACAGGAAGATGCTGGAGTCGGTGGTAGATGTGGACCACGTCCTGCAGTCCCGTACGCTCCGCGAGTTCGATGAGCGCTACACCTCTGTGATGTTCGGCTACAAGACCTGCCAGGACTACTACCGGGACGCCAGCCCCTGCTACAAACTACCTCGCACCACCATCCCTGTGCTGTGCCTGAATGCAGCGGACGATCCCTTCTCTCCAGAGCACACTATCCCAATGGCAGAGGCCCAACGCCTGCCCAACGTGGCCCTGCTGTTCCGATTCCAGGATTGGGAATCGGCCCCAGCTGTGAATGTGGATAAGcTGGACTGTGCCTTTAACACCAGCCTGCATGAGCAGCCCAGGGTCTTTCAGGGCAGGGTCCTGGGAGGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003775 True 2016 mRNA 0.50 9 17942587 17950139

Neighbor

gene id symbol gene type direction distance location
AMCG00003774 LOC107589773 coding upstream 3689 17933862 ~ 17938898 (+)
AMCG00003772 LOC104943415 coding upstream 26524 17899908 ~ 17916063 (+)
AMCG00003773 LOC106571177 coding upstream 53744 17881204 ~ 17888843 (+)
AMCG00003769 NA coding upstream 145119 17796461 ~ 17797468 (+)
AMCG00003767 NA coding upstream 153618 17787268 ~ 17788969 (+)
AMCG00003771 NA coding downstream 4159 17954298 ~ 17970590 (+)
AMCG00003786 NA coding downstream 244144 18194283 ~ 18199528 (+)
AMCG00003787 tram2,LOC106607554 coding downstream 252298 18202437 ~ 18208797 (+)
AMCG00003785 mrpl19 coding downstream 326319 18276458 ~ 18279829 (+)
AMCG00003790 NA coding downstream 338761 18288900 ~ 18320263 (+)
G2967 NA non-coding upstream 686137 17254266 ~ 17256450 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding upstream 732546 17208035 ~ 17210041 (+)
G2861 NA non-coding upstream 1008567 16868299 ~ 16934020 (+)
G2836 NA non-coding upstream 1343258 16599058 ~ 16599329 (+)
G2833 NA non-coding upstream 1345218 16593264 ~ 16597369 (+)
G3265 NA non-coding downstream 488667 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 594845 18544984 ~ 18545538 (+)
G3370 NA non-coding downstream 995443 18945582 ~ 18946131 (+)
G3373 NA non-coding downstream 999615 18949754 ~ 18950254 (+)
G3375 NA non-coding downstream 1001113 18951252 ~ 18971124 (+)
G3047 NA other upstream 258599 17681817 ~ 17683988 (+)
AMCG00003744 NA other upstream 899993 17032570 ~ 17042594 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 1902947 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 2624359 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 3075829 14851752 ~ 14866758 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 181780 18131919 ~ 18142633 (+)
G3108 NA other downstream 196521 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 1321826 19271965 ~ 19397686 (+)
G3751 NA other downstream 3599062 21549201 ~ 21549533 (+)
G3771 NA other downstream 3795711 21745850 ~ 21760630 (+)

Expression


Co-expression Network